Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01101 ATGGCAGCATTATCTACCCATAAAATTCAAGCTGGCAAGGATACTATTACCAAGAAGTTGACCTTGAGTCAGGCAATTGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAGATTGTTTAATTGGCTTGTAGAACAAGTTAATAAATCACTTGAAGTGGGTAAACGACGTACTGGGAGATCCATAAGTATCCTTGATATTTATGGATTTGAGTCATTCAAGAATAACAGCTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATAGGCATCTGTTTAAACTTGAGCAGGAGGTTCCTGGGTGTTTTGATGCCTGGAAGGGGGAGGGGTGTGTTGTTTACTTCAGTAAATTGCCTGTCACACGATGGAAGAAAACAACCATAATACAACAAAAAACTGGTGTTACATCATACGCTTTGTGTGTGATTTTGGATAGTGTTTGCGTTCTTCATAGCAACATTGCAATTTACATGTTTCAGGAATATGAATTGGATGGCATTGATTGGACCAAAGTAGATTTTGAGGACAACCAAGTGTGTTTGGATCTCTTTGAAAAGAAGCCTCTTGGGCTATTCTCTTTGTTGGACGAGGAATCAAATTTCCCCAGGGCCACTGATCTAACTCTTGCCAATAAACTTAAGCAGCACCTGCACACTAATCCTTGCTTTAAAGAGGAAAGAGGCAGGGCTTTTGGTGTCTGTCATTATGCAGGGGAGGTTAGTGTCAGTTCTTATGGACCTTTGAAAGTTTTGTATGATACAAGTGGCTTCCTAGAAAAGAATAGAGATCCACTACCGTCTGGTTCCATTCAACTACTGTCATCATGTAGCTGTGAACTACTTCAGTTGTTCTCCAAGACGCTTAATCAGCCTCAAAAGCAATCAAACAACTCGTATGGAGGTGCTCTGGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGAGTATGCTCAGCTGGAGAGCACCACACCACACTTTATTCGCTGTATAAAGACAAATACTAAGCAACTTCCTGGAATATATGATCAAGATCTTGTACTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCTGGATATCCTACTCGAATGACACATCAAGAATTTTCCAGAAGGTATGGATTTCTGCTTTGTGAGGCAAACACATCTCCGGACCCATTGAGCATTTCAGTTGCTGTTTTGCAACAGTTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACAAAACTGTATCTTCGAACTGGGCAGATTGGGGCACTGGAGAACAGGAGAAAACATATTTTGCAGGGAGTAATTGAGATTCAGAGAAGCTTTCGGGGTTATCAAGCTCGCTGTCATTATCATGAGCTTAAGAAGGGAGTGACTACTTTACAATCATTTGTTCGTGGAGAAATTGGAAGAAGGGAATATGGTGTTATGGTGAAGTCTTCTATGATTATTTCTGCTGAAAATATTAAAGAGATGCAGGCAGCCACAACACTACAATCTGTAACGCGTGGGTGGCTGGTTCGGAGGGATGCTGATGGCTTGAATAAGTTAAAGAAAAGTCCTGAAAGTGCAAGATCTAGGCGAAGGTCATGTGTGAATTTTCCTGAAGACACGTCAAGTGAGAGGGTCCAGAATCTGCCTTCAGCTTTAGATGAACTCCAAAGGCGGGTTGTCAAGGCTGAAGCTACTATAGAGCAAAGGGAAGAGGAAAATGCTGAACTGAAGGATCAACTGAAACAATTTGAGAGTAGATGGATTGATTACGAGAAAAGGATGAAATCAATGGAGGACGTGTGGCAAAAACAGATGGCATCTTTGCAAACAAGCCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAGCAACCAACATGCAAGACGTGATGTACCATCACCTTTCGGCTATGACTCAGAAGATTCTACTTCCATGGGATCTCGAACACCTGGGGTAAGCACACCTTTGAAGTATTGTGGTAGTCTTTCTGAAGCTGGACGAAGGAGAGATGGTCCTGCCACTTTGGTTTCAGTCAGCCACCTGATGAAGGAATTTGATCAACGCAGACAGACCTTTGATTTTGATGCCAGAGCTCTGGCTGAGGCTAGAGCAGGTCAACCTTGTAACTCGAATTCCATTGAAGAACTTCGGAAACTCAAACATAGGTTTGAGGCGTGGAAGAAAGATTACAAGGCTAGATTAAAAGAAACAAAAGCAAGACTTCAAAAAGTAGCGAATACAGAAATGGATAAAAGGCGGAAATGGTGGGGGAAATTGAGTTCTAAAGCACACTATAGCTAG 2334 0.4173 MAALSTHKIQAGKDTITKKLTLSQAIDARDALAKFIYARLFNWLVEQVNKSLEVGKRRTGRSISILDIYGFESFKNNSFEQFCINYANERLQQHFNRHLFKLEQEVPGCFDAWKGEGCVVYFSKLPVTRWKKTTIIQQKTGVTSYALCVILDSVCVLHSNIAIYMFQEYELDGIDWTKVDFEDNQVCLDLFEKKPLGLFSLLDEESNFPRATDLTLANKLKQHLHTNPCFKEERGRAFGVCHYAGEVSVSSYGPLKVLYDTSGFLEKNRDPLPSGSIQLLSSCSCELLQLFSKTLNQPQKQSNNSYGGALDSQKQSVGTKFKEYAQLESTTPHFIRCIKTNTKQLPGIYDQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFLLCEANTSPDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALENRRKHILQGVIEIQRSFRGYQARCHYHELKKGVTTLQSFVRGEIGRREYGVMVKSSMIISAENIKEMQAATTLQSVTRGWLVRRDADGLNKLKKSPESARSRRRSCVNFPEDTSSERVQNLPSALDELQRRVVKAEATIEQREEENAELKDQLKQFESRWIDYEKRMKSMEDVWQKQMASLQTSLAAARKSLASENASNQHARRDVPSPFGYDSEDSTSMGSRTPGVSTPLKYCGSLSEAGRRRDGPATLVSVSHLMKEFDQRRQTFDFDARALAEARAGQPCNSNSIEELRKLKHRFEAWKKDYKARLKETKARLQKVANTEMDKRRKWWGKLSSKAHYS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01101 777 ProSiteProfiles IQ motif profile. 444 471 IPR000048 GO:0005515
Spst5g01101 777 Gene3D Kinesin motor domain 331 373 IPR036961 -
Spst5g01101 777 Gene3D - 374 441 - -
Spst5g01101 777 Pfam IQ calmodulin-binding motif 504 520 IPR000048 GO:0005515
Spst5g01101 777 Pfam IQ calmodulin-binding motif 446 463 IPR000048 GO:0005515
Spst5g01101 777 ProSiteProfiles Myosin motor domain profile. 1 440 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01101 777 PANTHER MYOSIN 167 766 - -
Spst5g01101 777 SMART MYSc_2a 1 441 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01101 777 PRINTS Myosin heavy chain signature 62 90 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01101 777 PRINTS Myosin heavy chain signature 177 205 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01101 777 MobiDBLite consensus disorder prediction 528 555 - -
Spst5g01101 777 Gene3D - 444 493 - -
Spst5g01101 777 Gene3D Kinesin motor domain 57 71 IPR036961 -
Spst5g01101 777 ProSiteProfiles IQ motif profile. 502 531 IPR000048 GO:0005515
Spst5g01101 777 Gene3D - 167 330 - -
Spst5g01101 777 Gene3D - 72 105 - -
Spst5g01101 777 MobiDBLite consensus disorder prediction 627 666 - -
Spst5g01101 777 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 491 IPR027417 -
Spst5g01101 777 Coils Coil 561 602 - -
Spst5g01101 777 SMART iq_5 441 463 IPR000048 GO:0005515
Spst5g01101 777 SMART iq_5 464 486 IPR000048 GO:0005515
Spst5g01101 777 SMART iq_5 501 523 IPR000048 GO:0005515
Spst5g01101 777 MobiDBLite consensus disorder prediction 648 666 - -
Spst5g01101 777 ProSiteProfiles IQ motif profile. 465 493 IPR000048 GO:0005515
Spst5g01101 777 Gene3D Myosin VI head, motor domain, U50 subdomain 3 56 - -
Spst5g01101 777 Pfam Myosin head (motor domain) 3 105 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01101 777 Pfam Myosin head (motor domain) 167 428 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01101 777 Coils Coil 738 758 - -
Spst5g01101 777 MobiDBLite consensus disorder prediction 528 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01101 Spst-Chr5 12337272 12343267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01101 1 771 Myosins gene family AT4G27370 49.107 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01101 K10357 - gmx:100801876 966.066