Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01098 ATGGCTTCTTCATCATCATCATTATCATCTTCTTCTTCCACATGCAGCGACGACAAACTCCAATGCTTTCATTGCAAGTCCGAGATAACAACCTTCATTAACGGGTGGCCGCTTGACGATGGCACTGTAGCTCAGCTCTGTAACAGATGCGGCTCTCATTTCGAAGATGGAAGCTTCTGTGAGACATTTCACTGGGATCACGGTGGATGGGAAGATTGTATAATTTGCAACAAGGTAAGAGGTTGCATTGTGGATGCGTTGTGTCAAAGAATGAAGTTCACTTTACGCTTTTGGGAAAGATTTGTTGCAATGATTGTGCAAGGAAACTTATTCGAGGAGAATAATTTGTGCTACGCTGTCTGTAATAAGCTCCAATCTATGATAGAATTGGATTCTATAGATTAA 405 0.4148 MASSSSSLSSSSSTCSDDKLQCFHCKSEITTFINGWPLDDGTVAQLCNRCGSHFEDGSFCETFHWDHGGWEDCIICNKVRGCIVDALCQRMKFTLRFWERFVAMIVQGNLFEENNLCYAVCNKLQSMIELDSID 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01098 134 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 24 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01098 Spst-Chr5 12262103 12262959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01098 35 82 B3 DNA Binding Superfamily AT2G30470 52.083 1.30e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01098 - - pvu:PHAVU_005G086100g 99.3673