Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01081 ATGCACCAGTTGTCCAATCTGAGTAATTCAGAAGCAGCCACCCTCACCGAAAAATCAGATGTTTATTCATTTGGGGTAGTTATAATAGAAATCATCTCTGATAGGCCTGCTTTAAGCTATGGTCTTCCAACAGAGAAAATTAGTTTAGCATCACGGGCATTGGATTCTGAACTAAATGGTGAGTTACATGAGATGATAGACCCAAATCCAGTTGGCAAAGTGAGAGTTTCTTCTCTTAAAAAGGTGTGGGAAGTGCTAAAAGGTGCCTAG 270 0.4037 MHQLSNLSNSEAATLTEKSDVYSFGVVIIEIISDRPALSYGLPTEKISLASRALDSELNGELHEMIDPNPVGKVRVSSLKKVWEVLKGA 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01081 89 PANTHER OS07G0166700 PROTEIN 12 85 IPR045272 GO:0004714|GO:0006468
Spst5g01081 89 SUPERFAMILY Protein kinase-like (PK-like) 11 71 IPR011009 -
Spst5g01081 89 Gene3D Transferase(Phosphotransferase) domain 1 4 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01081 Spst-Chr5 11974114 11975901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01081 15 85 Receptor kinase-like Gene Family AT2G39360 49.296 1.36e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst5g01081 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01081 - - vun:114184690 114.775