Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01080 ATGGTGATGATGAAACTTGTAAAGTGGGTTTCCTTTGTTCTTGTTGTTTATTTGTTTTTGGTGAATGGTTCATTTGCTACATTCACTCCTCGTGATAATTATCTAATTACTTGTGGTTCCTCCCAAAGCATCACTTTCCAAGATCGCACTTTCGTTCCTGATTCACAGCATTCTTCACCGGAGTTGAAAACATCGAATTCTGCTATTGCTAGTTCAAATTCTAGTGTCCCTTTCCCAATATACCAATCAGCTAGGATTTTCACTGAGAAAGCTTCTTATAGTTTTACGGTTGAGGAAGGTAGGCACTGGCTCAGGCTATATTTTTCTCCTCTTCCCAACTCAGCCTATAATTTGACTGCTGCTGTTATATCAGTGGTCACTGATGATTTTGTTCTCTTATACAACTTCTCCTTTAGGAATTACAATGGTTCATATATGTTTAGGGAGTATGCCATCAATGTAACCTCTGAGACCTTAACTGTCACCTTCATTCCTTCTAATGGTTCAGTAGCTTTTGTCAATGCAATTGAAGTTGTTTCAATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCTCTTAACCCAACTGCACCATTCAATGGCCTTTCTGAACTAGCTTTTGAGACTGTTTATCGCTTAAACGTAGGAGGTCCCTTGCTCACGCCCCAGAATGACACCCTGGGAAGGACTTGGGAGAATGATAAGAAATACCTCCATGTGAATAGTTCAGTCACCAATGTGTCTGTTAACCCTTCCAGCATTAAGTATCATCCCGGTGTTACACCTGAGACGGCACCGAATTGGGTCTATGCCACTTCTGAAGCAATGGGGGATGCAAATGTAGCCAATTCAAATTTCAACATTACTTGGGTCTTTACTGTGGATCCAAACTTCTCCTATTTTATCCGCGTGCACTTTTGTGATATTATTAGCAAGTCTCTCAACACTTTAGTTTTCAATTTGTTCATAAATACTGACATAGCTCTTGGAAGCCTTGACCTCTCATCCATAACTAATGATTTGTCTGTGCCTTACTATAAAGACTTTATTTCCAATGCCTCAGCAGACTCCAACATTTTGACAGTAAGTGTAGGTCCTGATACAATGGCAGGTATCACAAATGCCACTATGAATGGACTGGAGGTTATAAAGATCAGCAATGCATTCAAGAGCTTGGATGGACTTTCTTCGGTTGAGAGTCTCCTTCCTAGTTCGTCATCAAGTAAAAGCAAGATGGGAATAATAGTTGGTTCTTCTATTGGAGTTGTGGCTGCCATAGCTTTGGTTGGTTTGTGTTATTGTTGCTTGGTGAGATACAAATCGAAGTCTACTCAGCAGGGTCATTCTTGGCTGCCTTTACCCTTATATGGAAACTCTCAGACCATGACAAAAATGTCAACAACTTCTCAGAAGAGTGCAACTGCAAGCTGCATTTCTTTAGCTTCATCAAATCTCGGACGGTTCTTCACTTTCCAAGAGATCCTAGATGCAACCAACAAGTTTGATGAGAAGCTGCTTCTTGGTGTTGGTGGCTTTGGCAGGGTTTATAAAGGAACACTTGAAGATGGGACCAATGTAGCTGTTAAAAGGGGAAACCCCAGATCCGAGCAAGGTCTTGCCGAATTCCGAACAGAAATTGAGATGTTATCCAAGTTACGCCATCGTCATCTTGTGTCCCTTATTGGCTATTGTGATGAGAGATCTGAAATGGTTCTTGTGTACGAATACATGGCTAATGGACCTCTCAGGAGTCATTTGTATGGAACTGACCTACCACCTCTATCATGGAAACAACGGCTTGAAATTTGCATTGGAGCATCAAGAGGTCTTCATTATCTCCACACTGGAGCATCTCAAAGCATAATTCATCGCGATGTAAAGACAACTAACATCCTTTTAGATGATAACTTTGTTGCTAAGGTTGCTGACTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGGTAGTTTCGGTTATCTGGATCCTGAATACTTCAGAAGGCAACAACTTACAGAGAAATCAGATGTATATTCATTTGGAGTAGTTTTGATGGAAGTGTTATGCACAAGACCTGCCTTGAACCCTGTCCTTCCAAGGGAGCAGGTTAACATAGCTGAGTGGGCAATGAGCTGGCAGAAGAAAGGAATGCTTGATCAAATCATGGATCAGAATCTGGTGGGGAAAGTCAATCCTGCTTCTCTTAAGAAGTTTGGGGAAACAGCTGAGAAGTGCTTGGCCGAGTATGGAGTGGATAGGCCTTCTATGGGCGATGTCTTGTGGAATCTTGAATATGCTTTGCAGCTTCAAGAGACCTCATCAGCACTCATGGAGCCTGAAGATAACAGCACAAACCATATTACTGGAATTCAGTTGACTCCCCTTGAGCCTTTTGATAACAGTGTTAGTATGATTGGTGGGGGCAACTCTTTCACAGATGATGATGCAGAAGATGCTGCTACAAGTGCAGTGTTTTCACAATTGGTTAATCCTCGCGGAAGATGA 2529 0.4187 MVMMKLVKWVSFVLVVYLFLVNGSFATFTPRDNYLITCGSSQSITFQDRTFVPDSQHSSPELKTSNSAIASSNSSVPFPIYQSARIFTEKASYSFTVEEGRHWLRLYFSPLPNSAYNLTAAVISVVTDDFVLLYNFSFRNYNGSYMFREYAINVTSETLTVTFIPSNGSVAFVNAIEVVSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNVGGPLLTPQNDTLGRTWENDKKYLHVNSSVTNVSVNPSSIKYHPGVTPETAPNWVYATSEAMGDANVANSNFNITWVFTVDPNFSYFIRVHFCDIISKSLNTLVFNLFINTDIALGSLDLSSITNDLSVPYYKDFISNASADSNILTVSVGPDTMAGITNATMNGLEVIKISNAFKSLDGLSSVESLLPSSSSSKSKMGIIVGSSIGVVAAIALVGLCYCCLVRYKSKSTQQGHSWLPLPLYGNSQTMTKMSTTSQKSATASCISLASSNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMVLVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGASRGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPLEPFDNSVSMIGGGNSFTDDDAEDAATSAVFSQLVNPRGR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01080 842 ProSiteProfiles Protein kinase domain profile. 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01080 842 FunFam Receptor-like protein kinase FERONIA 206 387 - -
Spst5g01080 842 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Spst5g01080 842 SMART serkin_6 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01080 842 PANTHER OS07G0166700 PROTEIN 487 778 IPR045272 GO:0004714|GO:0006468
Spst5g01080 842 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Spst5g01080 842 FunFam Putative receptor-like protein kinase 33 182 - -
Spst5g01080 842 Gene3D Transferase(Phosphotransferase) domain 1 577 796 - -
Spst5g01080 842 FunFam receptor-like protein kinase FERONIA 462 576 - -
Spst5g01080 842 FunFam Receptor-like protein kinase FERONIA 577 793 - -
Spst5g01080 842 SUPERFAMILY Protein kinase-like (PK-like) 479 772 IPR011009 -
Spst5g01080 842 CDD STKc_IRAK 507 772 - -
Spst5g01080 842 Gene3D - 205 387 - -
Spst5g01080 842 Gene3D - 33 182 - -
Spst5g01080 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Spst5g01080 842 Pfam Malectin-like domain 36 384 IPR024788 -
Spst5g01080 842 Pfam Protein tyrosine and serine/threonine kinase 506 767 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01080 Spst-Chr5 11872816 11875344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01080 4 842 Receptor kinase-like Gene Family AT3G46290 51.643 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst5g01080 Malectin_like 1.3e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01080 - - gmx:100809700 1387.47