Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01061 ATGGAAGAAGACTGCAATCTCCCACTTCAGCTATTAAGTCAGACTTATGACAAGGTTTCAAAGCTGTGTCTCCGAAAGTTGAAGGTGCACATGGATCATCAAGTGATGGCAGACATAGAGTCTCGAAATGTGGAAGCCCCCTCTGATGTATTCCACAAAGGAAAACGTCAAGTAACACTTAAGTTTGATGATGTTGTCTATAAAATTAAGACAAAGAAAGGTGGATTACTTGTGAAGAACAGAGAGGCGGTTGTAAAAGAGATACTGAAGGGAGTGACAGGTGTTGTTGAACCTGGTGAAATGCTGGCCATGTTAGGCCCATCCGGGAGTGGCAAAACAACTCTGCTCACAGCATTGGGAGGCAGGCTTGGAGGGAAGCTTCACGGTAGCATAACTTACAATGGTGAAGCTTTCTCAAATGCCATGAAGAGGAACACAGGCTTTGTTACCCAAGATGATGTTCTCTACCCCCACTTGACTGTGCTTGAGACCCTGGTGTTCACTGCACTTCTCAGACTGCCCAACAGTGTCACCAAGGAAAAGAAAGTTGAGCATGCAAAAGCTGTGATGGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATAGTTGGAAGTCCTCACTTGAGGGGGGTTTCTGGGGGAGAGAGAAAGAGGGTTAGCATTGGACAAGAACTACTCATAAACCCAAGCTTGTTGTTTCTTGATGAACCTACCTCTGGCCTGGACTCAACCACAGCACAAAGAATTGTCTCAACCTTATGGGAGCTAGCATGTGGGGGGAGAACTGTTGTGATGACAATACACCAACCTTCAAGTAGGCTATACTACATGTTTCATAAGGTGTTATTGCTATCTGAAGGGAACACATTGTATTTTGGAAAGGGATCTGAAGCCATTGAATATTTTTCTAATATTGGATATGCCCCATCATTGGCCATGAACCCCGCAGATTTCCTTTTGGATCTTGCAAACGGTATCTACACTGATGAAAATAATGCAGATCATACCATAGATAAACAGAAATTGATTTCTGTGTGTAAGAGAAATTATGCTGCACAATTGAAGTCATCACTTAAAGGAATCAATGACTCTGGCAAAGACCAGAATAGATTTCAAGAAAAGGAAAAATGGCCTACCAACTGGGCACAGCAATTCCTTGTACTATTAAGAAGAGACATCAAAGAGAGAAGGCATGAAGCATTCTCTGTTCTGCGGGTTTGTCAGGTCCTTGTGGTTGCTCTTGTTTCAGGACTACTGTGGTATAAGTCTGATATCTCACACTTGCAGGATCAGATTGGGCTTCTATTCTTCGTATCTGGCTTTTGGGGTTTTTTCCCTCTCTTCCAAGCAATTTTCACCTTTCCTCAAGAGCTAACGATGCTACAGAAAGAAAGATCTTCTGGAATGTACAGGCTTTCGTCATACTTCATGTCAAGGGTGGTAGCTGACCTTCCCATGGAACTTGTTCTTCCCACCATATTCCTTTTCATAACCTATTGGATGGCAGGGTTGAAGGCCAAAGTGGTCAACTTCATTTACACGCTTCTCGCTCTCTTACTCAATGTGTTGGTAGCACAAGGTCTAGGCCTGGCCCTTGGTGCTTCTGTAATGGATCAAAAAGCTGCAACCACACTTGCCTCAGTCATCATGCTATGCTTTCTGCTGGCTGGTGGTTTTTATGTTCAACATGTTCCAAAGTTTATAGCATGGATTAAGTACCTTTCTATAAGCTACTACACCTACCAGCTCTTCATTGGGTCTCAATACAGCTATGGCGAGACATACCCTTGTTCCAATGGCCAGTGTCCTATTGTGGAGTTTCCTTCTATAAAGGAAATGGGGGTTCATTTTGGATTGCATGATCAACTCATGGCTGCATTAGGTCTAGTGGTAATGCTCATAGGTTACAGACTTATAGCCTATCTTGCTCTCATGAGGATTGGAGTGACAAAGAACTAG 1959 0.4329 MEEDCNLPLQLLSQTYDKVSKLCLRKLKVHMDHQVMADIESRNVEAPSDVFHKGKRQVTLKFDDVVYKIKTKKGGLLVKNREAVVKEILKGVTGVVEPGEMLAMLGPSGSGKTTLLTALGGRLGGKLHGSITYNGEAFSNAMKRNTGFVTQDDVLYPHLTVLETLVFTALLRLPNSVTKEKKVEHAKAVMDQLGLTKCKDSIVGSPHLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELACGGRTVVMTIHQPSSRLYYMFHKVLLLSEGNTLYFGKGSEAIEYFSNIGYAPSLAMNPADFLLDLANGIYTDENNADHTIDKQKLISVCKRNYAAQLKSSLKGINDSGKDQNRFQEKEKWPTNWAQQFLVLLRRDIKERRHEAFSVLRVCQVLVVALVSGLLWYKSDISHLQDQIGLLFFVSGFWGFFPLFQAIFTFPQELTMLQKERSSGMYRLSSYFMSRVVADLPMELVLPTIFLFITYWMAGLKAKVVNFIYTLLALLLNVLVAQGLGLALGASVMDQKAATTLASVIMLCFLLAGGFYVQHVPKFIAWIKYLSISYYTYQLFIGSQYSYGETYPCSNGQCPIVEFPSIKEMGVHFGLHDQLMAALGLVVMLIGYRLIAYLALMRIGVTKN 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01061 652 Pfam ABC-2 type transporter 383 589 IPR013525 GO:0016020|GO:0140359
Spst5g01061 652 FunFam ABC transporter G family member 22 77 305 - -
Spst5g01061 652 CDD ABCG_EPDR 58 293 - -
Spst5g01061 652 Pfam ABC transporter 89 239 IPR003439 GO:0005524
Spst5g01061 652 SMART AAA_5 98 288 IPR003593 GO:0016887
Spst5g01061 652 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 311 IPR003439 GO:0005524
Spst5g01061 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 305 IPR027417 -
Spst5g01061 652 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 49 641 - -
Spst5g01061 652 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524|GO:0016887
Spst5g01061 652 Gene3D - 74 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01061 Spst-Chr5 11204709 11214010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01061 87 325 Calmodulin-binding Proteins AT2G36910 26.721 5.85e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01061 K05681 - gmx:100816135 1022.69