Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01026 ATGGAAAGCGTTAGCTTGCTTCTGTTCTGCCTTGCTTTGCTGAACATTATAGCAGCTGTCACTGTGACAGAAAGTATTAATCCATCGCAATCCATAAGTGATGACCAGATCATTGTTTCACCCGGCAAAACCTATGCACTGGGATTCTTCAGTCCAGGCAATTCCAAGAACCGTTATGTGGGAATTTGGTATAATGAGATTCCAACACAGACTGTAGTATGGGTCGCAAACAGAGACAACCCTCTTACTGATTCATCAGGGGTTTTGAAGCTCAATGAAAGTGGAGTTCTTGTCCTTCTCAACCACAACAAGAGTGTTATCTGGTCATCCAACACAACAAGTTCAGCGCGACATCCGGTAGCAAAACTTTTGGATTCTGGAAATCTCATTGTGCAGGATGGAAACGGCAATGATGAGGCAAAAGATTTGCTGTGGCAAAGTTTTGATTATCCAGTGGACACAATCTTGCCAGGACAGAAGTTCGGAAGAAATCTAGTTACAGGTCTAAATCGGTACATGTCATCATGGAATAGCTCTGAGGATCCATCTCATGGTGTATATAGTTATCAACTTGATATTACTGGATATCCACAGTTTGTTTTGAGACAAGGAAATTCCAAAAGATACCGTTTTGGATCATGGAATGGTATTCAGTTTAGTGGAGCACCTCTATTGAAACAAAGTCCTTTAACTAGATTTAGTTTTATTTCTGATGAGGAGGAGTTGTATTTTAGATTTGAGCTTACTAACAAGTCACTTTTACATAGGATGGTATTAACACCAGATGGACATATCCTGGGGACTTATTGGGATAATGAACGAAAAATTTGGAACTTGCATGCACGAATTCCGGTGGATGACTGTGATTATTATGGCAAATGTGGAGCGTATGCTAGCTGCAATATAGACAATATCCCTCCATGTAATTGCTTGGATGGATTTGTACCCAAAACAGCTGACCTATATGGTAGTTGTGCCAGGAGATCTTCACTGAGTTGTCATGGAGACGGTTTTTTGCGGGTTTCAGGGTTGAAATTACCAGACACAGAGAGATCCTGGTTTAACAGAAATATGAGTCTTGAGGATTGTAAGATATTGTGCATGAACAATTGCTCCTGTATGGCTTATGCAGCCTTGGATGTCAGTAAAGGGCCCAGTGGGTGTTTACTCTGGTTTAATGATCTGGTTGACATAAGAAACTTGACCGATGTTGATGAAGATATATACATAAGGATGGCTAGGACAGAAGTAGAAGCTATTGAAGGAAAGCAATTACATAAATCCAATTTCAGGAAGCAAGAGACTGTTTTCATCAGTTTTGCGTTGTTTATTGGAATTTTAATCCTATGTTTCACCTTCATCATATATAGACGGTTGAAGACACGGCAGAAAGGAAAGATGGAAGGTAATCTAGAAAGGGATGTGAATGTAATAAATGAGCACGAGAAGGATGATCTAGAGCTACCCATGTTTGAGTTGTCTACAATTACTTCTGCAACCAAAAACTTTTCACCTGACAACAAACTAGGGGAAGGTGGCTTTGGATCAGTATATAAGGGCATCCTGCCCGATGGAGGAGAAATAGCTGTCAAGAGGCTCTCTGTGAATTCGAAACAAGGACTTCCTGAGTTCAAAAATGAAGTTATGCATATTGCAAAGCTTCAGCACAGGAATTTAGTGAGGCTACTAGGGTACTGCATTCAAGCAGGGGAAAGATTGCTTGTTTACGAATTTATGGCCAACAAAAGCTTGGATTCTTTCATATTTGATGAAAACAAGAGCATGTTACTAGATTGGCCAAGGCGCTTGCTGATTATCAATGGGGTTGCTCGGGGTCTTCTTTACCTTCATCATGATTCAAGGCATAGAATAGTTCATAGAGATCTCAAAGCCGGAAATGTTTTGTTAGATAGTGAAATGAACCCCAAAATCTCGGACTTTGGACTGGCTAGAAGCTTTGGAGGAAATGAAATAGAAGCAACCACAAAACATGTAGTTGGAACCTA 2006 0.4038 MESVSLLLFCLALLNIIAAVTVTESINPSQSISDDQIIVSPGKTYALGFFSPGNSKNRYVGIWYNEIPTQTVVWVANRDNPLTDSSGVLKLNESGVLVLLNHNKSVIWSSNTTSSARHPVAKLLDSGNLIVQDGNGNDEAKDLLWQSFDYPVDTILPGQKFGRNLVTGLNRYMSSWNSSEDPSHGVYSYQLDITGYPQFVLRQGNSKRYRFGSWNGIQFSGAPLLKQSPLTRFSFISDEEELYFRFELTNKSLLHRMVLTPDGHILGTYWDNERKIWNLHARIPVDDCDYYGKCGAYASCNIDNIPPCNCLDGFVPKTADLYGSCARRSSLSCHGDGFLRVSGLKLPDTERSWFNRNMSLEDCKILCMNNCSCMAYAALDVSKGPSGCLLWFNDLVDIRNLTDVDEDIYIRMARTEVEAIEGKQLHKSNFRKQETVFISFALFIGILILCFTFIIYRRLKTRQKGKMEGNLERDVNVINEHEKDDLELPMFELSTITSATKNFSPDNKLGEGGFGSVYKGILPDGGEIAVKRLSVNSKQGLPEFKNEVMHIAKLQHRNLVRLLGYCIQAGERLLVYEFMANKSLDSFIFDENKSMLLDWPRRLLIINGVARGLLYLHHDSRHRIVHRDLKAGNVLLDSEMNPKISDFGLARSFGGNEIEATTKHVVGT 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01026 668 SUPERFAMILY Protein kinase-like (PK-like) 488 668 IPR011009 -
Spst5g01026 668 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Spst5g01026 668 Gene3D - 18 148 IPR036426 -
Spst5g01026 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 579 668 - -
Spst5g01026 668 Pfam Protein tyrosine and serine/threonine kinase 506 653 IPR001245 GO:0004672|GO:0006468
Spst5g01026 668 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 661 - -
Spst5g01026 668 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Spst5g01026 668 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Spst5g01026 668 CDD B_lectin 29 151 IPR001480 -
Spst5g01026 668 Gene3D Transferase(Phosphotransferase) domain 1 579 668 - -
Spst5g01026 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Spst5g01026 668 Gene3D Hepatocyte Growth Factor 331 410 - -
Spst5g01026 668 SMART blect_4 29 151 IPR001480 -
Spst5g01026 668 SMART ntp_6 333 412 IPR003609 -
Spst5g01026 668 Pfam PAN-like domain 333 398 IPR003609 -
Spst5g01026 668 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
Spst5g01026 668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 148 - -
Spst5g01026 668 ProSiteProfiles Protein kinase domain profile. 503 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01026 668 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Spst5g01026 668 SMART serkin_6 503 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01026 668 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Spst5g01026 668 Pfam D-mannose binding lectin 71 176 IPR001480 -
Spst5g01026 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Spst5g01026 668 CDD PAN_AP_plant 331 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01026 Spst-Chr5 10389022 10392168 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01026 436 668 Receptor kinase-like Gene Family AT4G23190 52.564 3.00e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01026 PK_Tyr_Ser-Thr 5.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01026 - - vun:114184694 1185.24