Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01024 ATGATGGTAGAGAATAACGTAGAAGATGAGAAAGAAGAGCTTGAGCTTCCTTTCTTTGACCTTGCTACAATCTCCAAAGTAACTAATGGCTTCTCAATTAACAATAAGCTTGGAGAAGTTGGATTTGGGGCCGTATACCTGGGTACCCTAGCAGATGGACAAGAAATTGCTGTGAAGTGGCTCTCACAAAGTTCTGGACAAGGGTTTAATGATTTTAAGAATGAAATCATATTGATAGCCAAGCTTCAGCATCGGAACCTAGTTAAGCTTGTTGGTTATCCCTCAAAGGCTAAAATTTTAGATTGGTCTAAGCGCTTCAATATTAATTGTGGAGTTGCACGAGGACTTATGTATCTTCATCAAGATTCTAGGTTGAGGATAATACATGGAGACCTTAAAGCAAGTAATGTCCTACTTGATCATAAGTTCAACCCAAAAATATCTGATTTTGGCATGGCTAGAACTTTTGGGGGAGATCAGATTGAAGGAAATACAGAGAGGGTGATTGTATCTCAACATAATTTGTAA 528 0.3826 MMVENNVEDEKEELELPFFDLATISKVTNGFSINNKLGEVGFGAVYLGTLADGQEIAVKWLSQSSGQGFNDFKNEIILIAKLQHRNLVKLVGYPSKAKILDWSKRFNINCGVARGLMYLHQDSRLRIIHGDLKASNVLLDHKFNPKISDFGMARTFGGDQIEGNTERVIVSQHNL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01024 175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Spst5g01024 175 ProSiteProfiles Protein kinase domain profile. 31 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01024 175 FunFam Os07g0541700 protein 82 171 - -
Spst5g01024 175 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 169 - -
Spst5g01024 175 SMART serkin_6 31 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01024 175 Pfam Protein kinase domain 107 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01024 175 SUPERFAMILY Protein kinase-like (PK-like) 14 161 IPR011009 -
Spst5g01024 175 Pfam Protein tyrosine and serine/threonine kinase 32 96 IPR001245 GO:0004672|GO:0006468
Spst5g01024 175 Gene3D Transferase(Phosphotransferase) domain 1 96 173 - -
Spst5g01024 175 Gene3D Phosphorylase Kinase; domain 1 4 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01024 Spst-Chr5 10353241 10354076 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01024 19 169 Receptor kinase-like Gene Family AT4G11480 51.705 1.61e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01024 Pkinase 7.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01024 - - cave:132173746 241.506