Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00997 ATGGGAATTCAACAATATATGGGTATCATAAAGGTTATCTTTTGCGTCATTTCGGTTTTTCAAATTTTGGCCGTAATCAGCAATGAAGAGAAGAAAACTCAGGAAGAATTAATTAGCCAACTCTTTGATCCTACATCTGGGCTTTTAAATGAGGATACGGCAGAGGTACTGAGGATCGTATGTTGGGAAGAGTTGATTCGATTAAAGAAAGAAGCTGGGGATTTTGACTTATGCCTCTCAAAGGAATCTGATAGAAACACCAATGAATTTAGTTCAGAAATTGGCTCAGTAGCTAGAGAAAACATCAAAAAAATGATTAATGCATGTGATCCTCAATTAAAGGAAAATGTTCTTAACTGTATGAGAAAAAATAATTTCCCATTCCATAATCTCAAGGAAGAGGATATCTCCAAGATTTGGCAAGCAATATACCTGGGATCATTTCCATCTAGAAGATATTTGGGTCAAATTTTTCCCCAACACCACGTATCAGACACACCAAGCAAGGGACATGAATTACATACAAGTATTAAAGCTCAAAACTCTAATAGCAAGAACGCTAACTCTTCAAGCTCTGGAACTAGTATAGCAATACCAATAGTGGGAGTACTTTTAGTTGCAATATTGATCTTTTTATGTTATCGATTTTGTGGGAGTGGACAAGTTAGTCAAAATGATGAGAGACCCCTTCTCAGCATGAGCATGAATGACTACTCAGTTGGTTCTTCTTCCAATAATAATATCTTGTACAAAAATTCAATAAAAGAAGGACAAATTGAGATCCACTCATCAAGTATTCAATTGGGTGATGAGCCAAGGAACTCAGTGCATGAAGCTCAGTTAGGAAAAGTTGCTAGTGGTTGTGCAAGACCATCAATGGAGCTAAAACCTCCTCCTGGGAGAGCAGTAGTAAATGGAATGATTCCTTTAAAACCTCCTCCTGGAAGGCCTGATCTTCTTCCTCCTGAACCAATTAAGCCTCCTGAACCAATTAATCCTCATGATAATCCCATTGTTCCTTCTTCTTCTCCTCCTCCTTCCTCTCCCCATTCCCCTTCTCCTGCCCCTTCTCCTTCCCCTTCTGCTCCTCCCCCTCCTCCTCCTCCTCGTACACCAGCAAGGCCTACCAATGCTGGCCCTCCCCCTCCTCCACCTCCTAGGGGTGGCCCTAGAGGACCACCTCCTCCTCCCGGCAAAGGTCCTCGACCTCCACCACCACCACCACTAAAGGGTGGTGGTGCTGGTAAACCTTCTCCACCACCCCCTAGAAATGGTCGAGGTCCTCCAAGAGCTCCTCCTGGTCCAGGGGAAGAAGACGGCTATGGAGAAGGTTATGTTCCAAAAGCTAAGTTAAAGCCTTTTTTTTGGGATAAGGTTCAAGCTAACTCCGATCAAGCAATGGTATGGAATCAACTCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATTGAGACACTTTTTGGCTATAATGCTGCTGCCAATGCGGATAAAGGCAAAAGCCAACCAAAAAAAGAAGCTGCCTCCCAAGCAGCTACTCCCCAATATATACAAATCGTTAACGCAAAGAAAGCTCAAAATTTATCTATTCTATTAAAAGCATTGAGTGTAACATCAGAAGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTTCCCACAGAATTCCTTCAAACTTTGTTGAAGATGGCACCAACTTTGGAGGAAGAAAATAAGCTTCTACTTTTCAATGGTAATGTTGCCCAACTCACCCCAGCAGATAGATTCCTAAAAGCCCTAGTTGACATTCCCTATGCTTTTAAACGAATGGAAGCACTAATTTACATGGGTACTTTTCATGAGGATCTAAATAATACTCGAGATTCGTTTGCAATTTTGGAGGCCGCTTGTAAAAAGCTAAGAAGCAGTCGATTATTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTTCGTGGTGGTGCACAAGCATTCAAACTAGACACACTACTGAAATTATCTGATGTAAAAGGAGTAGATGGAAAGACCACATTGTTGCATTTTGTTGTTCAAGAGATAGTGCGCACTGAGGGCATAAGAGCTGCACGCATGGCAAAAGAGAACCATAGTTTCTCTAGTATAAAAACAGAAGACCTTCTTGAGGACATCTCTTGTGAATCAGATGAACATTATCGTGAACTTGGCCTTCAAGTTATTTCACATTTAAGCACTGAACTTGAGAATGTAAAGAAAGCAGCAGCTTTAGATGCTGATGGCTTAACAGGAACAACTGCAAGAATAGGGCATGGTCTCATAAAAACAAGAGACTTTGTAAACAAAGACCTGAGCAACATGAAGGATGATAAAGGGTTTCATGAGACTGTGAAGAGTTTCGTGGACAAAGCTGAGGATGATGCTAAAAGTTTGCTAGAAGAAGAGAAGAAAATTATGGCTCTAGTGAAGAGCACTGGTGATTACTTTCATGGGGATTCAGGGAAGGATGAAGGGTTGAGATTATTTATAATAGTACGTGATTTCTTGCTAATGTTGGATAAGGTGTGCAAGGAGATAAAAATTGCTGCACCAAAGAAGCCACCAGCAAAAAATCCAAAGCAAGAAACATCTAATCATTCTAGAAAACCTTCTTCCTCTGATTCACTTCCTCCTTCTCATGATTTACTTCGTCAGAAAATTTCTCCAGTAATCGCAAATAGGAGGACAGATGACTTTAGTTCAGATGATGAGAGTCCTTAG 2754 0.4081 MGIQQYMGIIKVIFCVISVFQILAVISNEEKKTQEELISQLFDPTSGLLNEDTAEVLRIVCWEELIRLKKEAGDFDLCLSKESDRNTNEFSSEIGSVARENIKKMINACDPQLKENVLNCMRKNNFPFHNLKEEDISKIWQAIYLGSFPSRRYLGQIFPQHHVSDTPSKGHELHTSIKAQNSNSKNANSSSSGTSIAIPIVGVLLVAILIFLCYRFCGSGQVSQNDERPLLSMSMNDYSVGSSSNNNILYKNSIKEGQIEIHSSSIQLGDEPRNSVHEAQLGKVASGCARPSMELKPPPGRAVVNGMIPLKPPPGRPDLLPPEPIKPPEPINPHDNPIVPSSSPPPSSPHSPSPAPSPSPSAPPPPPPPRTPARPTNAGPPPPPPPRGGPRGPPPPPGKGPRPPPPPPLKGGGAGKPSPPPPRNGRGPPRAPPGPGEEDGYGEGYVPKAKLKPFFWDKVQANSDQAMVWNQLKAGSFQFNEEMIETLFGYNAAANADKGKSQPKKEAASQAATPQYIQIVNAKKAQNLSILLKALSVTSEEVCDALLEGNELPTEFLQTLLKMAPTLEEENKLLLFNGNVAQLTPADRFLKALVDIPYAFKRMEALIYMGTFHEDLNNTRDSFAILEAACKKLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIVRTEGIRAARMAKENHSFSSIKTEDLLEDISCESDEHYRELGLQVISHLSTELENVKKAAALDADGLTGTTARIGHGLIKTRDFVNKDLSNMKDDKGFHETVKSFVDKAEDDAKSLLEEEKKIMALVKSTGDYFHGDSGKDEGLRLFIIVRDFLLMLDKVCKEIKIAAPKKPPAKNPKQETSNHSRKPSSSDSLPPSHDLLRQKISPVIANRRTDDFSSDDESP 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00997 917 Coils Coil 799 819 - -
Spst5g00997 917 Gene3D Formin, FH2 domain 446 885 IPR042201 -
Spst5g00997 917 Pfam Formin Homology 2 Domain 446 850 IPR015425 -
Spst5g00997 917 SMART it6_source 441 865 IPR015425 -
Spst5g00997 917 MobiDBLite consensus disorder prediction 310 435 - -
Spst5g00997 917 MobiDBLite consensus disorder prediction 861 917 - -
Spst5g00997 917 MobiDBLite consensus disorder prediction 285 445 - -
Spst5g00997 917 ProSiteProfiles Formin homology-2 (FH2) domain profile. 441 876 IPR015425 -
Spst5g00997 917 PANTHER FORMIN-RELATED 159 889 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst5g00997 917 SUPERFAMILY Formin homology 2 domain (FH2 domain) 514 858 - -
Spst5g00997 917 MobiDBLite consensus disorder prediction 869 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00997 Spst-Chr5 9664472 9667885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00997 419 908 FH2 protein (formin) Gene Family AT5G54650 62.475 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00997 - - gmx:100792872 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00997 5 9664472 9667885 Spst5g00997 5 9664472 9667885 ECH
Spst5g00997 5 9664472 9667885 Spst11g00773 11 31469139 31472945 PCT