Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00976 ATGGAAGAAACTACTAAATCGAAAGCCTCCTCCTCCTACCCAACAAAAAAAACAATAATAAAATTACTAACAACCCATCTCTTCCTTTTCTTGAGCCTCCATGTCTCCCAAGCCCAAACAGAGAAAAAGCCATCACCACCATCGTCACTGGAACTCGAGGCCTGCGACGGAATATTCCTGTCGTACACCCTCGTGGGGCGGCAGAAGGAGTACCCGCACGTGAAGAACGTGTCGAAGCAGGCGTGGGCGTTCAAGGCGGAAGCCACGCTGACGAACGTGGGAGATGAGGAGGTGCAGGGGTGGAAGATGTTTATAGGGTTCCAGCATCGCGAGATTCTGGTCTCCGCGGACGGCGCCGTGCTCATCGATGCCGGTGATTTTCCGGCTGCGGTGGGCAACGGGACGACGCTGGTGGGGACCGCCGTGACGGACTTGAGGACCGCCATTGAAACCGCCGGGGATCTGACCCAGATGAGTGCCAAGATTGATATTGTTGGGACGCAGTTTGGGTTGGGTGCTGGAGCCACGCCCATGCCCAAAACCATTACTCTCGAGAACGATGGATTCAAATGCCCTGCACCTACTCATCGAGCCACGAGAATGTTCACATGTTGCAGAAAGGACCCGACAGTGAAGGCAAAGCTAGCAAAAACAACCAAGTACCCACCTCGTAGGTATGGAGACCTAACCATCGCATACGACGTGCTTCAAGCTTTCCAGAACAACTACTATGTCCAAGTGACAATGGAGAACAAACACCCATTGGGTCGTCTTGATCATTGGAACTTGACATTTGAATGGCCAAAGGGAGAGTTCATATATTCCATTAAAGGAGCTTATGCTCGCAGAAAAGACCCTTCTGAGTGCTTGTATGGCGCAGCGGGAAAATTCTACAAGGACATGGATTTCTCAGAAGTTGCGACCTGTCAGAGGAAGCCAACAATCTCTGACCTTCCAGCAGAGAGAGCACAAGATGAAAAGGTTGGGAAACTCCCTTGGTGCTGCAGGAATGGCACCGTTTTGCCTCCGGTCATGGACAAGAACAAAGCTAAGTCAATGTTTCAGATGCAAGTGTTCAAAATGTCACCAGACACTGATAACAGAACCTCCATCACACCCCCTGCAAAGTGGAACATCGATGGTGTCATCAATCCGCATTACCAATGTGGTGCACCGGTAAGGGTTGACCCTCAGATTTTCCCTGACCCTAGTGGCCTAAGCGCAATCACCACAGCTGTTGCAAGTTGGCAAATAGTTTGCAACATAACCAAACCCAAGCCTCAGCAAAACCGTTGCTGTGTCTCCTTCTCAGCATTCTACAACGGATCAGCAATCCCTTGCAACACGTGTGCATGTGGCTGTGATGACACAAGCAAGTGCAACTCCAAAGCCTTTCCATTGCTTCTTCCACCAGAGGCTCTTCTTGTGCCGTTTGCAAACAGGACCCTGAAGGCACGTGCATGGGCCAAACTCAAACACCTGCACATGCCTAGCAAGCTCCCTTGTGCAGATAACTGCCCCGTCAGCATCAACTGGCACGTGAGTTCGGATCACAAGGATGGATGGACAGCTAGGATCACACTTTTCAACTGGGAGGATTACGCCTTTGATGATTGGTTCACCGCGATTCAGTTGAAGAATACTTTTGAGGATTTCAAAGATGTTTATTCCTTCAACGGGACAAGAATTCCTGGTCTCAAAACCATTTTCTTAGAAGGCCTAAAGGGTTTGAACTACTTGGCTGGAGAGACCAATGGAACATATGCTTACGACCCTAGAGTGCCAGGGAAACAACAATCTGTGGTTTCTTTCACCAAGAAGCACATAAAAAACTTTGATGTCACAAAAGATGGGTTCCCCACTAAGGTTTACTTCAACGGAATGGAGTGTTCACTTCCTCCAATTAGACCAGCCAAAAATTTGGGGCATAAATCTTCCATCAGTATCATCGCACTCGTATTCACTGCGTTTGTGAGTTTGTTGCTGATCTAA 1992 0.4905 MEETTKSKASSSYPTKKTIIKLLTTHLFLFLSLHVSQAQTEKKPSPPSSLELEACDGIFLSYTLVGRQKEYPHVKNVSKQAWAFKAEATLTNVGDEEVQGWKMFIGFQHREILVSADGAVLIDAGDFPAAVGNGTTLVGTAVTDLRTAIETAGDLTQMSAKIDIVGTQFGLGAGATPMPKTITLENDGFKCPAPTHRATRMFTCCRKDPTVKAKLAKTTKYPPRRYGDLTIAYDVLQAFQNNYYVQVTMENKHPLGRLDHWNLTFEWPKGEFIYSIKGAYARRKDPSECLYGAAGKFYKDMDFSEVATCQRKPTISDLPAERAQDEKVGKLPWCCRNGTVLPPVMDKNKAKSMFQMQVFKMSPDTDNRTSITPPAKWNIDGVINPHYQCGAPVRVDPQIFPDPSGLSAITTAVASWQIVCNITKPKPQQNRCCVSFSAFYNGSAIPCNTCACGCDDTSKCNSKAFPLLLPPEALLVPFANRTLKARAWAKLKHLHMPSKLPCADNCPVSINWHVSSDHKDGWTARITLFNWEDYAFDDWFTAIQLKNTFEDFKDVYSFNGTRIPGLKTIFLEGLKGLNYLAGETNGTYAYDPRVPGKQQSVVSFTKKHIKNFDVTKDGFPTKVYFNGMECSLPPIRPAKNLGHKSSISIIALVFTAFVSLLLI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00976 663 PANTHER COBRA-LIKE PROTEIN 7 17 662 - -
Spst5g00976 663 Pfam COBRA-like protein 243 423 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00976 Spst-Chr5 9368649 9371468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00976 27 663 COBRA Gene Family AT3G20580 58.193 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00976 - - gmx:100789175 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00976 5 9368649 9371468 Spst5g00976 5 9368649 9371468 ECH