Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00974 ATGGCCACCATCATTTTAAGGTCTAATGAAGTGGTTCATGCCTTGGGCTTCTTCTGTATCTTGTTGATGGTGCACAATTGTGGTGCCTATGAATTTGTAGTTGGAGGCCTAAAGGGTTGGAGTGTCCCAAGTGACCCCAATTCCAACCCTTATAGTCAATGGGCACAAAAGAGCAGATTTCAAATAGGAGACTCCCTAGTGTTCAACTACCCTTCTGGGCATGACTCAGTGATTCAAGTAAGTAGCCAAGACTATGCCAGTTGCAACACTGATGCATACAATGAAAAATTCTCAGACGGCCACACAGTCATCAAGCTCAACCAATCTGGGCCTCACTACTTCATCAGTGGAAACAAAAACAACTGTCTCAAAAATGAGAAACTGGTGGTCATTGTGCTGGCTGACAGGAACAATAAATACACAAACACCAGCCAAACAAGTCCTTCTCCTTCTCCGTCTCAATTAACAACACAATCATTAGCTCCTTCCCCAACACCTTCTCAGCAACAGGTTCCATCTCCAAAGGCAGCACCTCCTCAGCAAGAGGCTGCTTCTCCACCATCTCCACCATCAAACCAAACTCCAGCTCCAGCTCCTGTTAGTGATCAACCTACTCCTCCATCTCCTCCTCACAATGCTGCTTCTTCAATCTTGGTCAGTTTTGCTGGTTCTGTTGGAGCATTTATGGCATCAGTTCTGGTTTTTTCTTTCTAA 714 0.451 MATIILRSNEVVHALGFFCILLMVHNCGAYEFVVGGLKGWSVPSDPNSNPYSQWAQKSRFQIGDSLVFNYPSGHDSVIQVSSQDYASCNTDAYNEKFSDGHTVIKLNQSGPHYFISGNKNNCLKNEKLVVIVLADRNNKYTNTSQTSPSPSPSQLTTQSLAPSPTPSQQQVPSPKAAPPQQEAASPPSPPSNQTPAPAPVSDQPTPPSPPHNAASSILVSFAGSVGAFMASVLVFSF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00974 237 PANTHER BLUE COPPER PROTEIN 30 162 IPR039391 GO:0009055
Spst5g00974 237 CDD OsENODL1_like 30 133 IPR041846 -
Spst5g00974 237 MobiDBLite consensus disorder prediction 167 211 - -
Spst5g00974 237 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Spst5g00974 237 MobiDBLite consensus disorder prediction 140 214 - -
Spst5g00974 237 MobiDBLite consensus disorder prediction 140 166 - -
Spst5g00974 237 FunFam Early nodulin-like protein 9 30 144 - -
Spst5g00974 237 Gene3D - 30 146 IPR008972 -
Spst5g00974 237 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Spst5g00974 237 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00974 Spst-Chr5 9344493 9346048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00974 11 170 Phytocyanin Superfamily AT3G20570 51.479 5.27e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00974 - - gmx:100788637 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00974 5 9344493 9346048 Spst5g00974 5 9344493 9346048 ECH