Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00969 ATGTTTGGGCTATTTTTGTTGGATATTAACCAGAACCAATGGTCTGACGTATTTTACAACATTGTCTCAAAAGCAGCAAACGTAGGAACTTTGTTAGGAGTGGAAGGAAGCTATGATAACAAATTGCACGTGATGAGCGCAGAACTTCATTTGCCTTCGCCTGTTTTATTGACTAGGGAGTGTTATTTTGGAAGATACAGCAAGCAGCTATCTCATAGCACATGGGGGGTCGTGGATATATCATTGGAGAAGTTTCTTCCCTCCCCAACGAGCAATTTTTCGAAAAGACCATCGGGATGTTTAATTACAGGAATGCCTAATGGATACTCTAAGGTTATATGGGTAGAGCATGTAGAAGCAGAACATCATGCGGACGATTATTTCCAGTCTCTATTCACCTCCACTCTAGCTTTTGGTGCAACTCGTTGGGTTAATTCCTTAGTTCGATATAGCGAATGGTTACAAAGCCTATACGCAACCGCATTGGTTGCTGATGAAGGAGTTACTATAGCACAAGCAGGTAGGACAAGTTTGCTAAAACTGGCAGATAGAATGATGAAAACATTTTGTGGAAATGTGAGTTCTACCGCAGACAATCCATGGACGCAAATGGCATGTTCCTCATACGTGAGAATCATGGTGAAGAACAATAACATCAAAGAAAGTGGAAAGCCTCTTGGTACATCCGTGGTTTTCACTACTTCTATTTGGCTCGATGTCTCCCCAAATCGACTGTTCAACTTCCTTCGCCACGAGAATTCCAGAACTAAGTGGGATGCGCTTTCTCGTAGACATACTATTCGAGAATTCGCGTCGATACTCAAGGGTGAAAATCCAGGGAATCGTGTTTCCCTGATGCGAGCAAACAACTCACAGGGCAAGCTTGTAATCTGTTATCTGCAAGAGAGTTACCAAGACTCAACAGGTTCGTACGTGGTGTATGCTCCACTGGACGAGCAAGCTGTGGCAGCTCTTATACATGGATCCAACCCTGACAAAGTGATGATCCTACCATCAGGGTTTAGCATACTTCCTGGAAGGTTGCAGGAAGAGGATGATAGAAACTCTCGAAGTCTTCTAACAATCGCATTCCACATAGTTGAAAGTCGCACAAGTAAGCCATTTATTGCTCCTGAATCAGTAGAAATCATATACAAAGTCATTTCAGATACTGTTAACTCTATAACCGACTCAGTGCTGTATCATAATCATCGCAACAATTGGATGGATGATTGGAATAGTTAG 1245 0.4241 MFGLFLLDINQNQWSDVFYNIVSKAANVGTLLGVEGSYDNKLHVMSAELHLPSPVLLTRECYFGRYSKQLSHSTWGVVDISLEKFLPSPTSNFSKRPSGCLITGMPNGYSKVIWVEHVEAEHHADDYFQSLFTSTLAFGATRWVNSLVRYSEWLQSLYATALVADEGVTIAQAGRTSLLKLADRMMKTFCGNVSSTADNPWTQMACSSYVRIMVKNNNIKESGKPLGTSVVFTTSIWLDVSPNRLFNFLRHENSRTKWDALSRRHTIREFASILKGENPGNRVSLMRANNSQGKLVICYLQESYQDSTGSYVVYAPLDEQAVAALIHGSNPDKVMILPSGFSILPGRLQEEDDRNSRSLLTIAFHIVESRTSKPFIAPESVEIIYKVISDTVNSITDSVLYHNHRNNWMDDWNS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00969 414 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 10 398 IPR042160 -
Spst5g00969 414 ProSiteProfiles START domain profile. 1 156 IPR002913 GO:0008289
Spst5g00969 414 Pfam START domain 39 149 IPR002913 GO:0008289
Spst5g00969 414 SUPERFAMILY Bet v1-like 33 152 - -
Spst5g00969 414 SUPERFAMILY Bet v1-like 174 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00969 Spst-Chr5 9294958 9296865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00969 5 399 Homeobox Transcription Factor Family AT4G04890 42.446 2.56e-98 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00969 K09338 - jre:108992281 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00969 5 9294958 9296865 Spst10g01173 10 12503588 12508644 ECH
Spst5g00969 5 9294958 9296865 Spst2g00065 2 553106 556524 ECH
Spst5g00969 5 9294958 9296865 Spst5g00969 5 9294958 9296865 ECH