Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst5g00964 | ATGGCTGTTCGATCATCCTCTACCAATTTCATCTCATCAGAGTCTTCTTCTTCCAGTGACTCCGGCACCATCCACAACCAAAAGTATAGATACGATGTGTTTCTTAGTTTCAGAGGTCCTGACACCCGCAACTCTTTTGTTGATCATCTCTACTCTCATCTCAGCCGAAAGGGCATTTTCGTCTTTAAAGATGACCAGAAGCTCCACAAAGGAGAATCCATTTCATCACAGCTTCTACAAGCAATTAAAGATTCTCGGGTTTCTATCATCGTCTTTTCTCAAAATTACGCCTCCTCAACATGGTGTTTGGACGAAATGGCCGCTGTAGCTGATTTCCAACAGCAATCCAACCAAACTGTTTTCCCTGTTTTCTATGATGTGGATCCATCTGATGTGAGATATCAAAACGGGGTATACGAAAACTCCTTTGTTTTACACACAGAAAAATTCAAAGAAGATCCAGATAAGGTTGATAGATGGAAGAGAGCTATGAACGGTTTTGCCAATTCAGCTGGTTGGGATGTCAGAAACAAGCCAGAATTTGAAATAATTGTAGAAATTGTTGAAGAGGTAATAAAAACAATGGGTCACAAATTCTCTGGGTTTGTTGATGACCTTATTGGGATACAACCAGGTGTACAAGAATTAGAAGATAAATTAAGATTAAGGTCAAACATTGATGATGTTCAAGTTTTAGGAATATGGGGGATGAGTGGAATAGGAAAGACAACGCATGCTGCTGCCTTGTATGATAAAATCTCTCATAGGTTTGATGGTAGTTGTTTCATTGAGAATGTGAGTAAACTTCATAGGGATGGTGGCCGTACTGCTGTACATAAACAGATTATTAGTCAAACTTTTCCCGGAGAACGTCTTGATACAGATGATCCTGTTAAAATCTCAGGAATTGTAAAACATAGGCTACACAATATGAAGGTTCTTGTTGTTCTTGACAGTGTTGTTGATTCAGAGCTTTTAGATGATTTGGCGATAAAACCTGAATTGTTTTTCAAAGGAAGTAGAATGGTTATTACCACCACAGATGAGCACATTCTAAAAGCGTACAAAGCTCCTGTAATAATCCACAAGGTTTCATTATTGAATGATAATGATGCTCGTACATTGTTTTGTACAAAAGCCTTCAAAAGTGAAGAGCAAAGTAGTAGTTGTGCAGAGATGATTCCTGAGGTACTCAAATATGCCCAATGTCTTCCATTGGCAATTAGAGTAATGGGTTCTTTCTTGTGTACTCGAGAAGCTTTTGAATGGAAACAGGTCTTGGATAGATTAAAGAAGAGTCCAGATAATAAAATTATGGGTGTACTTCAAATAAGTGTTGATGGACTACAATACGAGGAAAAAGAAATATTTTTACACATTGCATGTTTTTTTAAAGGGGAGAGGGAGGATTATGTTAAGCGAATTCTAGACTGTTGTGGATTATACTCTCAAATTGGAATTAAAAGACTCATTGAGAAATCACTCATCACTATTAGAGATCAAGAAATTCTTATACATGACATGTTACAAGAATTGGGAAAGAAAATGGTTCGCGACCAATCTCCCGAAGAACCAGGATCACGAAGTAGAATATGGCTTCATAAAGACTTCTTTCACGTTTTGACGACAGAAACGGGAACAGAGCATGTGAAAGCCATAGTTCTAGATAAAAAAGAAGATATCTCCGAATGTAGTGTTGATGGATTGTCAAAAATGAAGAAGCTTACATTACTCATATTATATCACAACAACTTTTCAGGAAGCCTCCATTATCTTTCTGACAGGCTGAAATATCTATTGTGGCATGATTATCCTTTTGCTTCTCTGCCACCATATTTTACAGCCTCAAATCTTGTGGAATTGAATATGCCTAATAGTCGCATAAAACGTTTATGGGAAGGTCGCAAGAGTTGTCCCTATTTGAAAAGGATAGATTTAAGCAATTCCATCTTCCTAACTGAAACTCCGGACTTTTCTGGAATCGTAAATCTTGAAAGGCTAGATCTTTCTGGATGTACAAATTTATTACAAGTTCATTCATCAATGGGATTTCTAAAAAATCTAGCTTTCTTGAATTTGCGATATTGTTGCAGTCTTGTTATGATCACCTTTCATTGCGTGACCGACATGCGTTCTCTGAAAGTTCTACATCTCTCGGGATGTAATAAACTTGAAAGCACCCCAGATTTTACAAGGACGCCAAATCTTGAGTACCTTGACATGGATGAATGTACAAGTTTATCTTCTATTCATGAATCTATTCGAGTCCTTTCAAATCTTACATTCTTCAGTTTAAGAGGCTGCACAGAGCTTGACAGTATACCAGCTGAAATTAATTCTTTAGCATCTCTTCAAACTCTAGATTTATGCGGTTGTTCGAAACTCAATCCGAAACTTGATCCCAATTTAAATTCACGGGAACTTTGGATTCGGAGAGGGGCTGCTCGTGATCTGCCCTTATCATCCGATTTAAAATCTTTGATTTTTTTGGACCTAGGCTCTTGCAATCTATATGCATTACCTGGTGCCATTGGAGAGTTAAGGTGCTTGGAAAGACTGAATTTACAGGGAAACAATTTGACTTCAATACCTGGCTCAATCAGGAAGCTTCATTGTCTAGCATATTTAAATTTGTCTCATTCTAGTTTGCTTCGAGCTCTTCCTCACCTTCCAATGGGAGGAGCCACATCAGGGGGGAAGTATTTTAAAACAGTATCTGGATCTCGTGATCATAGGTCAGGCTTATATCTTTTTTATTGTCCCATGAAGGTTCACACATCGTTCAAACCTGGGATTTGGAGTTTGGAGCTTGTCTGGTTTTTCAGACTAATTCAGGAACCCTATCATTTTCGATGTGGCTTTGACATTGTTATTCCTTGGGGTTTGAAAATTCCACGGTGGTTCAGTGACACATTTGAAGGGGACTCCATTAAAAGGATAGTAAAATTTAACGTGACCGAAGACTGGTTTGGCTTTGCCTTTTGTGTTATATTTGAGCTAAACAATGATCCTGGGGTTGCTAGTTCTTCCTCGCAGTCACATCCGTTTTATCTTTCTTTTGAAAGTGAATATACAGAAGAATACTTTGATATGCCACTTAGTTTGAATGTGAACCAGACTAATGAATCAAAGAAGCATATTTGGATCATTTATATATCTCGAGAACACTGTCATTTTGTGAAAACAGGAGCACATATCACATTTAAAGCCGAGCCATGTGTGAAGATCTATGCATGGGGAATGAGGAGTATATTCAGGCAAGACGTACCTGCCTTTGAAATGATGAAACTAGGAAATCCTTTTCCACTCCAAACCGATGTACACCGTCCTTACTTTGGTTCTGTGGAAAAGAGCAACACCAACTCTGGTCCTAAATTCCAGCTTCCTTACAATTGGTTACTCTCAGAAGAAGACAAAGATGAGAAAGTTAGTGTAGAAGTCAAAGAAAACAATTTGTCTCATGCGGGGCTTTAA | 3474 | 0.3814 | MAVRSSSTNFISSESSSSSDSGTIHNQKYRYDVFLSFRGPDTRNSFVDHLYSHLSRKGIFVFKDDQKLHKGESISSQLLQAIKDSRVSIIVFSQNYASSTWCLDEMAAVADFQQQSNQTVFPVFYDVDPSDVRYQNGVYENSFVLHTEKFKEDPDKVDRWKRAMNGFANSAGWDVRNKPEFEIIVEIVEEVIKTMGHKFSGFVDDLIGIQPGVQELEDKLRLRSNIDDVQVLGIWGMSGIGKTTHAAALYDKISHRFDGSCFIENVSKLHRDGGRTAVHKQIISQTFPGERLDTDDPVKISGIVKHRLHNMKVLVVLDSVVDSELLDDLAIKPELFFKGSRMVITTTDEHILKAYKAPVIIHKVSLLNDNDARTLFCTKAFKSEEQSSSCAEMIPEVLKYAQCLPLAIRVMGSFLCTREAFEWKQVLDRLKKSPDNKIMGVLQISVDGLQYEEKEIFLHIACFFKGEREDYVKRILDCCGLYSQIGIKRLIEKSLITIRDQEILIHDMLQELGKKMVRDQSPEEPGSRSRIWLHKDFFHVLTTETGTEHVKAIVLDKKEDISECSVDGLSKMKKLTLLILYHNNFSGSLHYLSDRLKYLLWHDYPFASLPPYFTASNLVELNMPNSRIKRLWEGRKSCPYLKRIDLSNSIFLTETPDFSGIVNLERLDLSGCTNLLQVHSSMGFLKNLAFLNLRYCCSLVMITFHCVTDMRSLKVLHLSGCNKLESTPDFTRTPNLEYLDMDECTSLSSIHESIRVLSNLTFFSLRGCTELDSIPAEINSLASLQTLDLCGCSKLNPKLDPNLNSRELWIRRGAARDLPLSSDLKSLIFLDLGSCNLYALPGAIGELRCLERLNLQGNNLTSIPGSIRKLHCLAYLNLSHSSLLRALPHLPMGGATSGGKYFKTVSGSRDHRSGLYLFYCPMKVHTSFKPGIWSLELVWFFRLIQEPYHFRCGFDIVIPWGLKIPRWFSDTFEGDSIKRIVKFNVTEDWFGFAFCVIFELNNDPGVASSSSQSHPFYLSFESEYTEEYFDMPLSLNVNQTNESKKHIWIIYISREHCHFVKTGAHITFKAEPCVKIYAWGMRSIFRQDVPAFEMMKLGNPFPLQTDVHRPYFGSVEKSNTNSGPKFQLPYNWLLSEEDKDEKVSVEVKENNLSHAGL | 1157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst5g00964 | 1157 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 31 | 699 | IPR044974 | GO:0006952 | |
Spst5g00964 | 1157 | SMART | till_3 | 30 | 170 | IPR000157 | GO:0007165 | |
Spst5g00964 | 1157 | SUPERFAMILY | L domain-like | 569 | 886 | - | - | |
Spst5g00964 | 1157 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Spst5g00964 | 1157 | Gene3D | - | 28 | 200 | IPR035897 | - | |
Spst5g00964 | 1157 | Pfam | NB-ARC domain | 226 | 434 | IPR002182 | GO:0043531 | |
Spst5g00964 | 1157 | Pfam | Leucine Rich Repeat | 617 | 634 | IPR011713 | - | |
Spst5g00964 | 1157 | Gene3D | - | 366 | 450 | IPR042197 | - | |
Spst5g00964 | 1157 | ProSiteProfiles | Leucine-rich repeat profile. | 849 | 870 | IPR001611 | GO:0005515 | |
Spst5g00964 | 1157 | Pfam | TIR domain | 31 | 194 | IPR000157 | GO:0007165 | |
Spst5g00964 | 1157 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 203 | 460 | IPR027417 | - | |
Spst5g00964 | 1157 | Gene3D | Ribonuclease Inhibitor | 807 | 898 | IPR032675 | - | |
Spst5g00964 | 1157 | Gene3D | Ribonuclease Inhibitor | 704 | 806 | IPR032675 | - | |
Spst5g00964 | 1157 | ProSiteProfiles | TIR domain profile. | 29 | 195 | IPR000157 | GO:0007165 | |
Spst5g00964 | 1157 | PRINTS | Disease resistance protein signature | 231 | 246 | - | - | |
Spst5g00964 | 1157 | PRINTS | Disease resistance protein signature | 401 | 415 | - | - | |
Spst5g00964 | 1157 | PRINTS | Disease resistance protein signature | 779 | 795 | - | - | |
Spst5g00964 | 1157 | PRINTS | Disease resistance protein signature | 307 | 321 | - | - | |
Spst5g00964 | 1157 | Gene3D | - | 204 | 361 | IPR027417 | - | |
Spst5g00964 | 1157 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 27 | 197 | - | - | |
Spst5g00964 | 1157 | SUPERFAMILY | "Winged helix" DNA-binding domain | 436 | 541 | IPR036390 | - | |
Spst5g00964 | 1157 | Gene3D | Ribonuclease Inhibitor | 533 | 703 | IPR032675 | - | |
Spst5g00964 | 1157 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 24 | 173 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst5g00964 | Spst-Chr5 | 9140592 | 9144835 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst5g00964 | 31 | 853 | WRKY Transcription Factor Family | AT4G12020 | 30.994 | 4.87e-92 | 323 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst5g00964 | - | - | vra:106778496 | 1461.05 |