Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00964 ATGGCTGTTCGATCATCCTCTACCAATTTCATCTCATCAGAGTCTTCTTCTTCCAGTGACTCCGGCACCATCCACAACCAAAAGTATAGATACGATGTGTTTCTTAGTTTCAGAGGTCCTGACACCCGCAACTCTTTTGTTGATCATCTCTACTCTCATCTCAGCCGAAAGGGCATTTTCGTCTTTAAAGATGACCAGAAGCTCCACAAAGGAGAATCCATTTCATCACAGCTTCTACAAGCAATTAAAGATTCTCGGGTTTCTATCATCGTCTTTTCTCAAAATTACGCCTCCTCAACATGGTGTTTGGACGAAATGGCCGCTGTAGCTGATTTCCAACAGCAATCCAACCAAACTGTTTTCCCTGTTTTCTATGATGTGGATCCATCTGATGTGAGATATCAAAACGGGGTATACGAAAACTCCTTTGTTTTACACACAGAAAAATTCAAAGAAGATCCAGATAAGGTTGATAGATGGAAGAGAGCTATGAACGGTTTTGCCAATTCAGCTGGTTGGGATGTCAGAAACAAGCCAGAATTTGAAATAATTGTAGAAATTGTTGAAGAGGTAATAAAAACAATGGGTCACAAATTCTCTGGGTTTGTTGATGACCTTATTGGGATACAACCAGGTGTACAAGAATTAGAAGATAAATTAAGATTAAGGTCAAACATTGATGATGTTCAAGTTTTAGGAATATGGGGGATGAGTGGAATAGGAAAGACAACGCATGCTGCTGCCTTGTATGATAAAATCTCTCATAGGTTTGATGGTAGTTGTTTCATTGAGAATGTGAGTAAACTTCATAGGGATGGTGGCCGTACTGCTGTACATAAACAGATTATTAGTCAAACTTTTCCCGGAGAACGTCTTGATACAGATGATCCTGTTAAAATCTCAGGAATTGTAAAACATAGGCTACACAATATGAAGGTTCTTGTTGTTCTTGACAGTGTTGTTGATTCAGAGCTTTTAGATGATTTGGCGATAAAACCTGAATTGTTTTTCAAAGGAAGTAGAATGGTTATTACCACCACAGATGAGCACATTCTAAAAGCGTACAAAGCTCCTGTAATAATCCACAAGGTTTCATTATTGAATGATAATGATGCTCGTACATTGTTTTGTACAAAAGCCTTCAAAAGTGAAGAGCAAAGTAGTAGTTGTGCAGAGATGATTCCTGAGGTACTCAAATATGCCCAATGTCTTCCATTGGCAATTAGAGTAATGGGTTCTTTCTTGTGTACTCGAGAAGCTTTTGAATGGAAACAGGTCTTGGATAGATTAAAGAAGAGTCCAGATAATAAAATTATGGGTGTACTTCAAATAAGTGTTGATGGACTACAATACGAGGAAAAAGAAATATTTTTACACATTGCATGTTTTTTTAAAGGGGAGAGGGAGGATTATGTTAAGCGAATTCTAGACTGTTGTGGATTATACTCTCAAATTGGAATTAAAAGACTCATTGAGAAATCACTCATCACTATTAGAGATCAAGAAATTCTTATACATGACATGTTACAAGAATTGGGAAAGAAAATGGTTCGCGACCAATCTCCCGAAGAACCAGGATCACGAAGTAGAATATGGCTTCATAAAGACTTCTTTCACGTTTTGACGACAGAAACGGGAACAGAGCATGTGAAAGCCATAGTTCTAGATAAAAAAGAAGATATCTCCGAATGTAGTGTTGATGGATTGTCAAAAATGAAGAAGCTTACATTACTCATATTATATCACAACAACTTTTCAGGAAGCCTCCATTATCTTTCTGACAGGCTGAAATATCTATTGTGGCATGATTATCCTTTTGCTTCTCTGCCACCATATTTTACAGCCTCAAATCTTGTGGAATTGAATATGCCTAATAGTCGCATAAAACGTTTATGGGAAGGTCGCAAGAGTTGTCCCTATTTGAAAAGGATAGATTTAAGCAATTCCATCTTCCTAACTGAAACTCCGGACTTTTCTGGAATCGTAAATCTTGAAAGGCTAGATCTTTCTGGATGTACAAATTTATTACAAGTTCATTCATCAATGGGATTTCTAAAAAATCTAGCTTTCTTGAATTTGCGATATTGTTGCAGTCTTGTTATGATCACCTTTCATTGCGTGACCGACATGCGTTCTCTGAAAGTTCTACATCTCTCGGGATGTAATAAACTTGAAAGCACCCCAGATTTTACAAGGACGCCAAATCTTGAGTACCTTGACATGGATGAATGTACAAGTTTATCTTCTATTCATGAATCTATTCGAGTCCTTTCAAATCTTACATTCTTCAGTTTAAGAGGCTGCACAGAGCTTGACAGTATACCAGCTGAAATTAATTCTTTAGCATCTCTTCAAACTCTAGATTTATGCGGTTGTTCGAAACTCAATCCGAAACTTGATCCCAATTTAAATTCACGGGAACTTTGGATTCGGAGAGGGGCTGCTCGTGATCTGCCCTTATCATCCGATTTAAAATCTTTGATTTTTTTGGACCTAGGCTCTTGCAATCTATATGCATTACCTGGTGCCATTGGAGAGTTAAGGTGCTTGGAAAGACTGAATTTACAGGGAAACAATTTGACTTCAATACCTGGCTCAATCAGGAAGCTTCATTGTCTAGCATATTTAAATTTGTCTCATTCTAGTTTGCTTCGAGCTCTTCCTCACCTTCCAATGGGAGGAGCCACATCAGGGGGGAAGTATTTTAAAACAGTATCTGGATCTCGTGATCATAGGTCAGGCTTATATCTTTTTTATTGTCCCATGAAGGTTCACACATCGTTCAAACCTGGGATTTGGAGTTTGGAGCTTGTCTGGTTTTTCAGACTAATTCAGGAACCCTATCATTTTCGATGTGGCTTTGACATTGTTATTCCTTGGGGTTTGAAAATTCCACGGTGGTTCAGTGACACATTTGAAGGGGACTCCATTAAAAGGATAGTAAAATTTAACGTGACCGAAGACTGGTTTGGCTTTGCCTTTTGTGTTATATTTGAGCTAAACAATGATCCTGGGGTTGCTAGTTCTTCCTCGCAGTCACATCCGTTTTATCTTTCTTTTGAAAGTGAATATACAGAAGAATACTTTGATATGCCACTTAGTTTGAATGTGAACCAGACTAATGAATCAAAGAAGCATATTTGGATCATTTATATATCTCGAGAACACTGTCATTTTGTGAAAACAGGAGCACATATCACATTTAAAGCCGAGCCATGTGTGAAGATCTATGCATGGGGAATGAGGAGTATATTCAGGCAAGACGTACCTGCCTTTGAAATGATGAAACTAGGAAATCCTTTTCCACTCCAAACCGATGTACACCGTCCTTACTTTGGTTCTGTGGAAAAGAGCAACACCAACTCTGGTCCTAAATTCCAGCTTCCTTACAATTGGTTACTCTCAGAAGAAGACAAAGATGAGAAAGTTAGTGTAGAAGTCAAAGAAAACAATTTGTCTCATGCGGGGCTTTAA 3474 0.3814 MAVRSSSTNFISSESSSSSDSGTIHNQKYRYDVFLSFRGPDTRNSFVDHLYSHLSRKGIFVFKDDQKLHKGESISSQLLQAIKDSRVSIIVFSQNYASSTWCLDEMAAVADFQQQSNQTVFPVFYDVDPSDVRYQNGVYENSFVLHTEKFKEDPDKVDRWKRAMNGFANSAGWDVRNKPEFEIIVEIVEEVIKTMGHKFSGFVDDLIGIQPGVQELEDKLRLRSNIDDVQVLGIWGMSGIGKTTHAAALYDKISHRFDGSCFIENVSKLHRDGGRTAVHKQIISQTFPGERLDTDDPVKISGIVKHRLHNMKVLVVLDSVVDSELLDDLAIKPELFFKGSRMVITTTDEHILKAYKAPVIIHKVSLLNDNDARTLFCTKAFKSEEQSSSCAEMIPEVLKYAQCLPLAIRVMGSFLCTREAFEWKQVLDRLKKSPDNKIMGVLQISVDGLQYEEKEIFLHIACFFKGEREDYVKRILDCCGLYSQIGIKRLIEKSLITIRDQEILIHDMLQELGKKMVRDQSPEEPGSRSRIWLHKDFFHVLTTETGTEHVKAIVLDKKEDISECSVDGLSKMKKLTLLILYHNNFSGSLHYLSDRLKYLLWHDYPFASLPPYFTASNLVELNMPNSRIKRLWEGRKSCPYLKRIDLSNSIFLTETPDFSGIVNLERLDLSGCTNLLQVHSSMGFLKNLAFLNLRYCCSLVMITFHCVTDMRSLKVLHLSGCNKLESTPDFTRTPNLEYLDMDECTSLSSIHESIRVLSNLTFFSLRGCTELDSIPAEINSLASLQTLDLCGCSKLNPKLDPNLNSRELWIRRGAARDLPLSSDLKSLIFLDLGSCNLYALPGAIGELRCLERLNLQGNNLTSIPGSIRKLHCLAYLNLSHSSLLRALPHLPMGGATSGGKYFKTVSGSRDHRSGLYLFYCPMKVHTSFKPGIWSLELVWFFRLIQEPYHFRCGFDIVIPWGLKIPRWFSDTFEGDSIKRIVKFNVTEDWFGFAFCVIFELNNDPGVASSSSQSHPFYLSFESEYTEEYFDMPLSLNVNQTNESKKHIWIIYISREHCHFVKTGAHITFKAEPCVKIYAWGMRSIFRQDVPAFEMMKLGNPFPLQTDVHRPYFGSVEKSNTNSGPKFQLPYNWLLSEEDKDEKVSVEVKENNLSHAGL 1157
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00964 1157 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 699 IPR044974 GO:0006952
Spst5g00964 1157 SMART till_3 30 170 IPR000157 GO:0007165
Spst5g00964 1157 SUPERFAMILY L domain-like 569 886 - -
Spst5g00964 1157 MobiDBLite consensus disorder prediction 1 22 - -
Spst5g00964 1157 Gene3D - 28 200 IPR035897 -
Spst5g00964 1157 Pfam NB-ARC domain 226 434 IPR002182 GO:0043531
Spst5g00964 1157 Pfam Leucine Rich Repeat 617 634 IPR011713 -
Spst5g00964 1157 Gene3D - 366 450 IPR042197 -
Spst5g00964 1157 ProSiteProfiles Leucine-rich repeat profile. 849 870 IPR001611 GO:0005515
Spst5g00964 1157 Pfam TIR domain 31 194 IPR000157 GO:0007165
Spst5g00964 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 460 IPR027417 -
Spst5g00964 1157 Gene3D Ribonuclease Inhibitor 807 898 IPR032675 -
Spst5g00964 1157 Gene3D Ribonuclease Inhibitor 704 806 IPR032675 -
Spst5g00964 1157 ProSiteProfiles TIR domain profile. 29 195 IPR000157 GO:0007165
Spst5g00964 1157 PRINTS Disease resistance protein signature 231 246 - -
Spst5g00964 1157 PRINTS Disease resistance protein signature 401 415 - -
Spst5g00964 1157 PRINTS Disease resistance protein signature 779 795 - -
Spst5g00964 1157 PRINTS Disease resistance protein signature 307 321 - -
Spst5g00964 1157 Gene3D - 204 361 IPR027417 -
Spst5g00964 1157 FunFam Disease resistance protein (TIR-NBS-LRR class) 27 197 - -
Spst5g00964 1157 SUPERFAMILY "Winged helix" DNA-binding domain 436 541 IPR036390 -
Spst5g00964 1157 Gene3D Ribonuclease Inhibitor 533 703 IPR032675 -
Spst5g00964 1157 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 173 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst5g00964 Spst-Chr5 9140592 9144835 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00964 31 853 WRKY Transcription Factor Family AT4G12020 30.994 4.87e-92 323
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00964 - - vra:106778496 1461.05