Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00950 ATGGTTCAAGCCATCAATGGAGAACCCCGGCTTGGAGCCTCTATACTTCGATTGTTCTTCCATGACTGTTTCGTCAATGGCTGCGATGCATCAATTTTATTGGATGACAGTGGCAGCTTTGTCGGTGAGAAAAATGCAGTACCTAACCGAAATTCAGTGAGGGTTTACGAAGTGATTGATACCATTAAAACTAAGGTTGAAGCTGCTTGCAATGGCACTGTCTTTTGTGCTGATATTCTAGCACTTGCAGCAAGAGATGGAGTAGTTCTGCTTGGAGGACCTTCATGGGCGGTACCTCTAGGTAGAAGAGACGCAACAACAGCAAGCGAAAGCGAAGCCAACGCCCAAATCCCTTCTCCGTTCTCCGACCTTCCCACACTCACTTCCATCTTCGCCGCCAAAGGCTTGAGCGCACGTGACCTCACCGTGCTCTCCGGCGGCCACACCATAGGCCAAGCGCAGTGCCAGTTTTTCAGAGCCCGCATCTACAACGAAACCAACATCGACACCAACTTCGCCGCGTCGAGAAGAGCCGTTTGCCCTGCCTCCGGTGGGGACACCATCTTGTCCCCTCTCGAGTCCCTCACTCCCATTCGCTTCGACAACAACTACTACTCCGAGCTCGTCGCTCGCCGTGGCCTTCTCCCCTCCGACCAAGTGCTCTTCGATGGTGGCTCTCAAGACCCTTTGGTGAGAACTTACAGTAACAGTAATGCTGCGTTTTTTGCTGATTTTTCAGATGCTATGGTTAAGATGGGTAATCTCGGTTCTCTCACTGGGACTGCCGGTGAGATCAGAAGGAATTGCAGGGTTGTGAATTGA 822 0.5134 MVQAINGEPRLGASILRLFFHDCFVNGCDASILLDDSGSFVGEKNAVPNRNSVRVYEVIDTIKTKVEAACNGTVFCADILALAARDGVVLLGGPSWAVPLGRRDATTASESEANAQIPSPFSDLPTLTSIFAAKGLSARDLTVLSGGHTIGQAQCQFFRARIYNETNIDTNFAASRRAVCPASGGDTILSPLESLTPIRFDNNYYSELVARRGLLPSDQVLFDGGSQDPLVRTYSNSNAAFFADFSDAMVKMGNLGSLTGTAGEIRRNCRVVN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00950 273 Gene3D Peroxidase, domain 2 118 252 - -
Spst5g00950 273 PANTHER PEROXIDASE 72-RELATED 2 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 SUPERFAMILY Heme-dependent peroxidases 3 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 Gene3D - 3 270 - -
Spst5g00950 273 CDD secretory_peroxidase 1 272 IPR033905 GO:0004601|GO:0042744
Spst5g00950 273 PRINTS Haem peroxidase superfamily signature 12 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Haem peroxidase superfamily signature 74 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Haem peroxidase superfamily signature 140 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Haem peroxidase superfamily signature 92 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 ProSitePatterns Peroxidases active site signature. 12 23 IPR019794 GO:0004601
Spst5g00950 273 Pfam Peroxidase 4 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 ProSiteProfiles Plant heme peroxidase family profile. 1 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 73 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 207 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 247 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 14 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 92 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 191 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 54 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 PRINTS Plant peroxidase signature 139 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g00950 273 FunFam Peroxidase 118 252 - -
Spst5g00950 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 140 150 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00950 Spst-Chr5 8914494 8917123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00950 4 273 Peroxidase AT5G05340 62.132 5.21e-120 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00950 K00430 - gmx:100806309 448.358