Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00942 ATGGCTTTGATTCATGAGGAGAACCTTGGCCCAACAACTCAACTAGCCTCAAGACATAAAAGATCAATTTACTGTAGGGCTGTACGGGCTATGAATGAAACACTGAAGCAAAATCGTCTATTGAGAGAACGAGGGGATGATAACTCGATCCCCCATTCTCAGAACAATATTAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTCCAACTTGATGGTCATGATGCCCTATATTCTCATCTGCATGACCAATTAAATTCACAAAAAGCAATGTCATTACCATCTTCACCACATGATTATAGAGGTCAGGCTTCGGAGAGAAGTGGACCGTCGAGATACGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTATTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGAGTAGGGATTGGTTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGCCGACTCCGACATCCTAATGATATAGTAATCGATGGAAGTGAATCTGAATTGTTTTCTTTTATTGTTTCAAACAGATCTGTTATTTATTTAGTGATGAAATTATATGCAGTTATCTTGTTTCTCGGTGCATGCACAAAGCCTCCACGCTTGTCAATGGTTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTGAGCGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGAATAAGGATGATACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGCCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGAATAATGACAGAATATCCAATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCACCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAACTCTGCACCTTGAGCAGACCATGGGATGGAGTACCAGCTGAGAGGGTAGAACATTCAACACGTCTGTACATGTTGCGTGATAGTTTCTATATCAGTCACGTGCTTCATTCTAAAATTTCCTTTTTTTTCTCTGCTCACCAGGTGGTTTATTCCGTTGCACATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTGATTTCAGGTCAGCAACTTTCCTTTATTGTTGGGCAGAATCTCACGAGAGGCCAAGTTGTCAGGAAATTCTTTCCCGTTTGGTGGACATCGAGTACTCCTTGTGCTGAAGCAATATCTTTGTACATAGAAAACTTTGGGTAG 1461 0.3997 MALIHEENLGPTTQLASRHKRSIYCRAVRAMNETLKQNRLLRERGDDNSIPHSQNNISSDANLQKNVSNFQLDGHDALYSHLHDQLNSQKAMSLPSSPHDYRGQASERSGPSRYGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNDIVIDGSESELFSFIVSNRSVIYLVMKLYAVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRIRMIRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTEYPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWDGVPAERVEHSTRLYMLRDSFYISHVLHSKISFFFSAHQVVYSVAHEASRLEIPEGPLGRLISGQQLSFIVGQNLTRGQVVRKFFPVWWTSSTPCAEAISLYIENFG 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00942 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Spst5g00942 486 Gene3D Transferase(Phosphotransferase) domain 1 236 407 - -
Spst5g00942 486 SMART serkin_6 151 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00942 486 MobiDBLite consensus disorder prediction 89 103 - -
Spst5g00942 486 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 85 442 - -
Spst5g00942 486 ProSiteProfiles Protein kinase domain profile. 151 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00942 486 MobiDBLite consensus disorder prediction 89 116 - -
Spst5g00942 486 Gene3D Phosphorylase Kinase; domain 1 142 214 - -
Spst5g00942 486 SUPERFAMILY Protein kinase-like (PK-like) 125 393 IPR011009 -
Spst5g00942 486 MobiDBLite consensus disorder prediction 42 61 - -
Spst5g00942 486 CDD STKc_MAP3K-like 157 398 - -
Spst5g00942 486 ProSitePatterns Protein kinases ATP-binding region signature. 157 178 IPR017441 GO:0005524
Spst5g00942 486 Pfam Protein kinase domain 153 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00942 Spst-Chr5 8800392 8807322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00942 26 442 MAP Kinase Kinase Kinase AT3G58640 64.133 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Spst5g00942 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00942 - - gmx:100810612 657.907