Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00918 ATGGGCATGAAGAGCACCGGGGGAGAGATTGTTCAAGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGACAGGCACAGTAAGGTTTACACTGCAAAGGGTCCTCGTGACCGCAGGGTTAGGCTCTCAGCACACACAGCAATTCAGTTCTACGATGTTCAGGACCGTTTAGGCTATGACAGACCAAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCCAAGAATGCCATTGACAAGCTGGCTGAGCTTCCTCCATGGCACCCTACTTCCAACACTGGAGATGCAGAGAACAACCATAACAATGCAGGGTCAACTGACATGGCCATTACAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTGCAAAGGCAATTAGGTGAGGACCATGATAACCACCATTCAGCTTTCATTCCTTCACCTATTGACACTGATGCAATAGCCTTCTTTCCCACAACCACTGCCACCTCCTCCATCAATTTTCAAACCTACCCTCCTGATATAATCTCAAGAACCAACAACTCCACTGAGGATCTTGGCCTTTCCCTCCACTCCTTCCAAGACCCTGGCCTGATTCATGGCCAGTCCCAAGCAGGTGCAAACCAAACACAAACCCCTTCCAATCACCAAACCCTCTTTTCTAGCTCAACTCAGGTGGAGTTTGAAGCCAATTACCCTAGGATTGTAACTTGGAACAATGATGCAGGCACAGATATGAACAGAGCCGGGTTCATGGTCAACTCAACAGCACTTCTAGGCCAAGGTGGTTCTGTTGCATATTCCCAAAGGGGGACCCTTCAGTCCAGTTTTCCACCATCACTTCGTCCTTGGGGTGACATTCCCATGGCTTCTTCCTCAGAACATCACAAGTCACAACCAATTCAACAGGCCTCCATCTTTGGCAGCAGGTTTCTGTCTGATGCTTTGCCAGGGTTCTGCATTCCTGCTAGAATTCAAGGCGAGGATGAGAGCCATGGTGTTGGTCCCGACAAGCCATCATCTTCATCACCTAATTCTCATCACTGA 1032 0.4884 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLAELPPWHPTSNTGDAENNHNNAGSTDMAITEQSESSGYNFQLQRQLGEDHDNHHSAFIPSPIDTDAIAFFPTTTATSSINFQTYPPDIISRTNNSTEDLGLSLHSFQDPGLIHGQSQAGANQTQTPSNHQTLFSSSTQVEFEANYPRIVTWNNDAGTDMNRAGFMVNSTALLGQGGSVAYSQRGTLQSSFPPSLRPWGDIPMASSSEHHKSQPIQQASIFGSRFLSDALPGFCIPARIQGEDESHGVGPDKPSSSSPNSHH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00918 343 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Spst5g00918 343 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 271 IPR005333 GO:0003700
Spst5g00918 343 MobiDBLite consensus disorder prediction 318 343 - -
Spst5g00918 343 Pfam TCP family transcription factor 23 129 IPR017887 -
Spst5g00918 343 MobiDBLite consensus disorder prediction 86 106 - -
Spst5g00918 343 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00918 Spst-Chr5 8551848 8552879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00918 8 343 TCP Transcription Factor Family AT1G53230 44.744 1.45e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst5g00918 TCP 8.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00918 - - pvu:PHAVU_005G097200g 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00918 5 8551848 8552879 Spst5g00918 5 8551848 8552879 ECH