Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00915 ATGGCGCAATTACCTCCAAAGATCCCAAACATGTCCCCAAGTTGGCCAGACTTCTCTTCTCCTCATCAGAAGATGCCATTGCCACCTCTTAACAACGGAACCACCAACAACAACACAGGCCATTATCATCATCAGCATCATCAAAGTCAAAACCCTTCCTGGGTGGATGAGTTCCTCGACTTCTCCTCCGCCCGACGCGGCGCTCACCGGCGGTCGGTGAGCGATTCCATCACCTACTTGGACTCACCAAGGTCTGGAGAGAACAACAACAATAACGATCATCATAACAATAGCAATGAGAATGAGTTTGACAAGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTGTCTGGGGTCCCCATGCCACCACAAACCACCTTGTCCTCCTCTAACCCTTCAAGCCCTTCGGATCAGAACTTCTTCCATGATGAGAAAGAGAGCCGCCAGAAGGAGATGAAGCTGCAAGAGGAGGACGAGGAGCACCGCCATCAATTGAAAAACGAAGCAGATGAGGTCGAAAGCCAATGCATACAGGAAATTTCGCAGCCTCCTAATGACACCAACACTTCTTCTTCCAACGAGAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAGGCTGAGGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTTAATGTGGACAATAGTGCCCTCAAACAAAGAATCGCTGCCCTTGCTCAAGACAAGATATTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGGCTGAGGCAAGTTTATCACCAACAGAGCCTCAAGAAGATGGAAAATGCCGCAGGGTCACCACCATTACCATCTCCATCACCAAATCCTATACGTGATGCTCAAACAGAAAAGGAAGTACAACTTATCAACGTTTGA 1014 0.4675 MAQLPPKIPNMSPSWPDFSSPHQKMPLPPLNNGTTNNNTGHYHHQHHQSQNPSWVDEFLDFSSARRGAHRRSVSDSITYLDSPRSGENNNNNDHHNNSNENEFDKFDDEQFMSMFTDEVVLSGVPMPPQTTLSSSNPSSPSDQNFFHDEKESRQKEMKLQEEDEEHRHQLKNEADEVESQCIQEISQPPNDTNTSSSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSLKKMENAAGSPPLPSPSPNPIRDAQTEKEVQLINV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00915 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 208 223 IPR004827 GO:0003700|GO:0006355
Spst5g00915 337 Pfam bZIP transcription factor 205 249 IPR004827 GO:0003700|GO:0006355
Spst5g00915 337 SMART brlzneu 201 265 IPR004827 GO:0003700|GO:0006355
Spst5g00915 337 MobiDBLite consensus disorder prediction 122 180 - -
Spst5g00915 337 Coils Coil 337 337 - -
Spst5g00915 337 MobiDBLite consensus disorder prediction 302 337 - -
Spst5g00915 337 MobiDBLite consensus disorder prediction 126 143 - -
Spst5g00915 337 MobiDBLite consensus disorder prediction 13 51 - -
Spst5g00915 337 Gene3D - 204 277 - -
Spst5g00915 337 MobiDBLite consensus disorder prediction 65 103 - -
Spst5g00915 337 MobiDBLite consensus disorder prediction 322 337 - -
Spst5g00915 337 FunFam Basic leucine zipper 61 204 277 - -
Spst5g00915 337 CDD bZIP_plant_RF2 206 256 IPR044759 GO:0003700|GO:0006355
Spst5g00915 337 MobiDBLite consensus disorder prediction 1 51 - -
Spst5g00915 337 PANTHER BASIC LEUCINE ZIPPER 34 1 328 - -
Spst5g00915 337 MobiDBLite consensus disorder prediction 75 96 - -
Spst5g00915 337 Coils Coil 284 304 - -
Spst5g00915 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 203 255 IPR004827 GO:0003700|GO:0006355
Spst5g00915 337 Coils Coil 160 187 - -
Spst5g00915 337 SUPERFAMILY Leucine zipper domain 205 259 IPR046347 GO:0003700|GO:0006355
Spst5g00915 337 MobiDBLite consensus disorder prediction 144 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00915 Spst-Chr5 8525142 8528181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00915 1 282 bZIP Transcription Factor Family AT3G58120 55.484 2.13e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst5g00915 bZIP_2 4.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00915 - - gmx:100101874 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00915 5 8525142 8528181 Spst5g00915 5 8525142 8528181 ECH