Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00882 ATGAAGAATCTCTGTTCTCAACTCAACTCTCTTCTCCCTAGTTATGATCCCAAGTTAACTCAGAAAGCGTTGGCTGTGCCTGATCAAATAGACGAAGCAATAAAGCACATCCAAACCCTAGACATGAGGTTGAAGATGGCGAAGGAGAAGAAAGAAAGGTTAATGGAAAGGAAGAGAACTTGTAGTGGTTCATCAGGTGCTTTTGAAGCAGGAGGTAGACTAAAACCACCAAAAATGGAAATTCATGAAACGGGTTCTGCGATTGAAATCATTCTAACATGTGGGGTCGATTACCACTTCGTTTTGTGTGAAATTATTCGAATATTGCATGAAGAGAATGTTGAGGTTATCACTGCCAATTCTTCGTTTGTTGGAGATTCAGAGATTCATGTTGTGCATGGGGAGGTTTGGAAATCTATGTTCCAATCTGGAGCTAGCAGAGTGAGTGAGAAGCTGAAATGGTTCGTAAACGGATCCATCAGCGATGTAGAAATGGAGCCTGAATTGTGGAATTCTGAAATTGCAGCTACACTGCTTCTAGATCCTACCCTAGACAATGGCTTACCACTAAATTAA 576 0.4115 MKNLCSQLNSLLPSYDPKLTQKALAVPDQIDEAIKHIQTLDMRLKMAKEKKERLMERKRTCSGSSGAFEAGGRLKPPKMEIHETGSAIEIILTCGVDYHFVLCEIIRILHEENVEVITANSSFVGDSEIHVVHGEVWKSMFQSGASRVSEKLKWFVNGSISDVEMEPELWNSEIAATLLLDPTLDNGLPLN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00882 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 154 - -
Spst5g00882 191 Coils Coil 30 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00882 Spst-Chr5 8114123 8114996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00882 1 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 34.940 9.03e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00882 - - gmx:100784042 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00882 5 8114123 8114996 Spst5g00882 5 8114123 8114996 ECH
Spst5g00882 5 8114123 8114996 Spst11g00975 11 33987299 33988369 PCT