Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00869 ATGGCGTCTTTACCGTCGGGTCTCGTCAACGGTACTTCCAAGGGCGTTGATTATTCTTCCGGTGAGATCCTTTCTTCCTACGAAGACGACAATACCAACAACGATTCTTCCAATGGCACTTTCATCGATCCCGCCAAGGGTGAAAAATGGTTGGGTGCACTAGCTGATGAAAAAGGACTGGCTGATGTTCATGCATCAAGGATGGCAAGAACATCCATAGTTCCTGCTACTGCCTATAGTTCATCTGAAGATTCTTTGAGCCGGGAAGTTATTGCTACTGTTGAGAAGAGTATGAAAGCATATACTGACAACCTTATGCGGTTTCTTGAGGGAATCAGTTCAAGGCTGTCAAAGTTGGAATTATATTGTTACAATCTCGACAAATCAATTGGAGCAATGCGATCTGATTTAAATAGTGATCATGAAGAGGCAGATTCAAAACTCAAATCACTTGATAAACACCTTCAGGAAGTACACAGGTCTGTGCAAATTTTGAGAGACAAGCAAGAGCTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCGGCTTGTTTGTAAAGAATCATCTTCCTCGAGCCATTCACAATCTAATGAGGAGAGATCTTCACCATCTTCTAAGGATCGAAGAAAAATTGATAATGCTTCTAACACACAGAACCTAGAGTTAGCTCTTGCCTTACCTTATCAAATTGCTCCCCGGCAACAGCCTGTGTCATCTTCCTATCAAGTGCCAGCCCCAAATGTGAGCCAAGCGACTCAACAACCTCACTATTACGTGATGCCACCTACCCCTTTGCCCAATCGACAAGCTCAGAATCAATATTTGTTGACTGATCCACTCTATCGAATTCCACAACCACCGACATCATCTCAGGTAACCCAATCCCCACCTGTGCAACAATTTTCTCAGTATCATCAGTTACAGCATCAACAACAACAATGGCCTCAACAGTTACCCCAGCAGATGGAAGTGCAACCTCCACAACCACCGTCAACTCAGTCTCAAGTGAGTCCCCCTGTGACAAATGTTTACACTCCTTATTCTACCAGCCAAGCTACAAATCATCTTCCCACAGAAACACCACCCAACAGCATGCCGATGCAAAGGCCTTATTCAGGGATTCCACCTCGAGGATCCAGCCATAGTGATGTCCTACCACATGGATACAGTGGAGCTGGTACAACAGTTCCAAAGCAACCTATGCTCCAGCACATGAAAGGCTCTATTTTAGCACAGCCAGGTGATGTGAATGGAACTAGCGGGATATATGCCACGCATCCTCCTGCTAGCCCCTACATTGTGTATGATGGTGAGAGTGCAAGAGCACATTATCCATCACAACCTTATCATAGTACTCAAGGTGGATATCCTCCAACTAGTGCTTCCCTTCACAATCCTGCACCACATAATCTTATGGTTAAGAGCTCTAGCCAGTCACAATTTATTCGTTTCCATCCCTACAGTGAGCTGATTGAGAAATTTGTGAGCATGGGATTTAGAGGTGATCACGTGGTAAGCACGATCCAGAGGATGCAAGAAACTGACCAGCCTGTAGATTTCAACTCTGTACTTGACCGGTTGAACGTGCATAATCCCCAGAGGGGATGGTCAGGGTAA 1617 0.4496 MASLPSGLVNGTSKGVDYSSGEILSSYEDDNTNNDSSNGTFIDPAKGEKWLGALADEKGLADVHASRMARTSIVPATAYSSSEDSLSREVIATVEKSMKAYTDNLMRFLEGISSRLSKLELYCYNLDKSIGAMRSDLNSDHEEADSKLKSLDKHLQEVHRSVQILRDKQELAETQKELAKLRLVCKESSSSSHSQSNEERSSPSSKDRRKIDNASNTQNLELALALPYQIAPRQQPVSSSYQVPAPNVSQATQQPHYYVMPPTPLPNRQAQNQYLLTDPLYRIPQPPTSSQVTQSPPVQQFSQYHQLQHQQQQWPQQLPQQMEVQPPQPPSTQSQVSPPVTNVYTPYSTSQATNHLPTETPPNSMPMQRPYSGIPPRGSSHSDVLPHGYSGAGTTVPKQPMLQHMKGSILAQPGDVNGTSGIYATHPPASPYIVYDGESARAHYPSQPYHSTQGGYPPTSASLHNPAPHNLMVKSSSQSQFIRFHPYSELIEKFVSMGFRGDHVVSTIQRMQETDQPVDFNSVLDRLNVHNPQRGWSG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00869 538 MobiDBLite consensus disorder prediction 281 321 - -
Spst5g00869 538 Coils Coil 164 184 - -
Spst5g00869 538 MobiDBLite consensus disorder prediction 186 212 - -
Spst5g00869 538 MobiDBLite consensus disorder prediction 335 367 - -
Spst5g00869 538 Pfam UBA-like domain (DUF1421) 487 531 IPR010820 -
Spst5g00869 538 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 11 538 - -
Spst5g00869 538 MobiDBLite consensus disorder prediction 281 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00869 Spst-Chr5 8001235 8004561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00869 486 538 Trihelix Transcription Factor Family AT5G14540 39.062 2.57e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00869 - - gmx:100527106 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00869 5 8001235 8004561 Spst5g00869 5 8001235 8004561 ECH