Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00849 ATGGGCTGTTGCGTCTCAACAAGCAGTCAGAGTACTTGTAGTAGCAGGAGCACCGGAGACACAACCGCTCCGATGTGTCTAGAAATAGGATTCTGTGGTCAAAAGAGTGGAAGGAGAAGATGCTCTGATCATGCTGTCTCTCTGCACCAATTACCATCCTTACCCAACAGAATTTTCACGAATGGAAAGAGCAGGTCTTCTTGCATATATACACAGCAGGGTCGTAAGGGTATTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGTCAGAAGATGTGACCTTTTGTGGTGTCTTTGATGGACATGGTCCACATGGTCACCTTGTTGCACACAGAGTCACAGACGCCTTGCCACTCAAACTGCTTTCATTTTTGCATCCCTCCGAATCAGGGCGAAATGGTTCAGGTAAAACTTGTTTCAGAGGCAACGCGAAGCCTGAAAGTGGAGAGTCTGAGAAAGATGCCACAGCTGAAGATAAACTGAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGAGCTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTCACTGTTGTGAAACAGGGTTCAAATTTATTCATAGGCAATATTGGAGACTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAGTTCAGTTGACCATTGATTTGAAGCCTGATTTGCCAAGAGAAGCTGAAAGAATCAAACGATGCAAGGGTAGGGTATTTGCATTACAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATACGGTGTGATTTCTATACCTGAATTTTCTCATCGGTTACTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCGGATGGGATCTGGGATGTTTTGAGCAACGAAGAGGTGGTTGGGATAGTATCTTCAGCACCGACTCGATCATCAGCAGCAAGGATTCTGGTGGATTCCGCGGCTCGAGAGTGGAAACTTAAATATCCTACTTCGAAAATGGATGACTGTGCTGTAGTGTGCCTATTTCTGGATGGAAAAATGGATTCAGAATCTGATTGTGATGAGCAATGCTTCTCTTCTGCTACCATCCAGAGCAACCATTCGGGTAATCCTGTTGAGACAGATGATGGTCAAAAGTCTGAGCCAACTTTGCAAAGGAACTTCACAGTGAGATCCTCGGAAGAGAATGCCACCTATGGAAGAGGAGTAGTATCTGCTGATGATGTTGAAGATATAACATCAGGCGCTGAAGATCAAAACTGGTTAGGTTTGGAGGGTGTGACCAGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCTGAGGAAAAGCCAGACTCCTGA 1422 0.4473 MGCCVSTSSQSTCSSRSTGDTTAPMCLEIGFCGQKSGRRRCSDHAVSLHQLPSLPNRIFTNGKSRSSCIYTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVAHRVTDALPLKLLSFLHPSESGRNGSGKTCFRGNAKPESGESEKDATAEDKLNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTVVKQGSNLFIGNIGDSRAIMGSKDSNDSMVAVQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGIWDVLSNEEVVGIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCFSSATIQSNHSGNPVETDDGQKSEPTLQRNFTVRSSEENATYGRGVVSADDVEDITSGAEDQNWLGLEGVTRVNSLVQLPRFSEEKPDS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00849 473 CDD PP2Cc 65 370 IPR001932 -
Spst5g00849 473 MobiDBLite consensus disorder prediction 1 20 - -
Spst5g00849 473 Pfam Protein phosphatase 2C 154 347 IPR001932 -
Spst5g00849 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Spst5g00849 473 SMART PP2C_4 55 368 IPR001932 -
Spst5g00849 473 MobiDBLite consensus disorder prediction 132 158 - -
Spst5g00849 473 FunFam probable protein phosphatase 2C 52 57 373 - -
Spst5g00849 473 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Spst5g00849 473 Gene3D - 57 372 IPR036457 -
Spst5g00849 473 PANTHER PROTEIN PHOSPHATASE 53 368 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00849 Spst-Chr5 7835733 7838020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00849 13 473 PP2C-type Phosphatase Gene Family AT1G03590 70.085 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00849 - - gmx:100777448 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00849 5 7835733 7838020 Spst5g00849 5 7835733 7838020 ECH
Spst5g00849 5 7835733 7838020 Spst11g01011 11 34275592 34280212 PCT