Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00842 ATGGTCAGGCGATTGGTTTTAAGGGACAGGAGTGACCAGAAGATTAACGTTGAGCTTGGGAAAATGAGTGAGGAGAGATCTGGTTCACAGTACAAGAGAGTGAAGATCCATGGAGAAGTTCTATTGGGATTTATGTTGATCTGCATAGTCCAGTTTTCACATGCAGACACTGATCCCTCTGATGTTACAGCAATAAATAATTTATATACTGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTCCTAGTGGAGGTGACCCGTGCGGACAAGCGTGGCAAGGTGTTCAATGTAATGGTTCATTCATACAAGAAATAACTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGACAGCTTAGGAAGTTTTGTTTCTATCAGAGCAATAGTTCTAAACAACAATCACATTGGGGGGACTATTCCATCCAGTTTGCCGGTCACTTTACAACACTTCTTTCTTTCAGATAACCAGCTCACTGGAAGTATTCCAGACTCTTTATCCACACTGAATGAATTGACTGACATGTCCCTTAACGACAATCTCTTAACAGGAGAAATACCAGATGCATTTCAGTCTCTTACTCAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTATGGAGAATTTGTCAGCTCTGACCAGTGTACATTTACAGAGCAATAACCTTTCTGGGACCCTGGAGGTTTTACAAGACCTTCCACTGCAAAATTTGAATGTTGAGAACAACCAGTTTGTTGGACCAATACCCCCAAAACTGTTAAGCATCCCTAACTTCAGAAATGATGGAAACCCGTTTAATCTTAATGTCAATGCTACTATAGCCCCATCACGTCCACATTCTCCAGTGACGGCATCGCCATCAGGAACTGTGGTTTCGGTGACACCATCATCTGGACGTTTACCTACTAAACCTACTGATGGACCAACTGCAGCAAAGGAATCAAATCCTGGGAAATCGAAAAAGAACACAAAAAAGGTGGTTTGGATATCTATTTCTGGTATATTGACGTTTATTATTGTAGTGTTGGGACTTCTTCTCTTCGTTCCAAGATGCAGCAGAAGAGAACGGGTTAACATAAGTTCCAAGCAACATCAAGTTGACACTTATGGAGGTGAAAGACAGAAGAATCCCAGAGAATATGAGGCTTTTGTCCAACCACTTAGTCAAACTGAGAAAGTACCAAAAGGAGTTGTAGTGAGGCCGAAAGGGGATCATCAAGAGGAGGCAAGCAGAGTGAGGGCAATTCCAAAGCCACAAAGCGAGAAACAGAAGGAAGAACAAAGAGTGGAAACAATCCCAAAGCTGTTAAATCATCAGATAGATATGAGTTCACTAGATGTATATGCCATGCCTTCTCCACCGCCACCTCCACCACTTACTACTGAGAGTGTGATTGTTGAACCAACCTCATTCCACAAAGGGGCTAACTTCAACCCTCCCAAAAAAAGTCCAGCTCCTACCACTTTTGCGAAAACTTTCACCATTGCATCCCTTCAACAGTTTACAAATAGCTTTTGTCAAGACAATCTTACAGGTTTAGGAATGCTTGGAAGTGTGTATAGGGCAGAGTTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTACTGATCATCAAACAGATGATGAATTTCTTGAATTGATAAACAACATTGACAGAATCCGGCATGCAAATATTGTTGAGCTTATTGGATACTGTGCAGAGCATGGCCAAAGGCTTCTTATTTATGAGTACTGCAGTAATGGTTCGCTGCAGGATGCACTTCATTCAGATGATGAATTCAAAACAAGACTGTCATGGAATGCTCGCATTCGGATAGCACTCGGGGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTGTCAGCCACCAGTTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGTTTCTGTTCGTCTATCTGATTGTGGTTTGGCTCCATTAATAGCTAAGGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAGCAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTAACAGGCCGTCAGTCCTACGACAGAACACGTCCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATCCCTCAACTGCATGACATTGATGCATTATCTAAGATGGTTGATCCTTCTCTTAAAGGAGATTACCCTGCCAAAGCATTGTCAAATTTTGCAGACATTATTTCCAGATGTGTTCAGTCGGAGCCAGAGTTTAGGCCAGCAATGTCAGAAGTTGTCTTGTACTTGGTAAATATGATCAGGAAGGAATCTCAACAAAGTGAATCAAATGAATAA 2409 0.4218 MVRRLVLRDRSDQKINVELGKMSEERSGSQYKRVKIHGEVLLGFMLICIVQFSHADTDPSDVTAINNLYTALGNPVLPGWVPSGGDPCGQAWQGVQCNGSFIQEITLNGANLGGELGDSLGSFVSIRAIVLNNNHIGGTIPSSLPVTLQHFFLSDNQLTGSIPDSLSTLNELTDMSLNDNLLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTSVHLQSNNLSGTLEVLQDLPLQNLNVENNQFVGPIPPKLLSIPNFRNDGNPFNLNVNATIAPSRPHSPVTASPSGTVVSVTPSSGRLPTKPTDGPTAAKESNPGKSKKNTKKVVWISISGILTFIIVVLGLLLFVPRCSRRERVNISSKQHQVDTYGGERQKNPREYEAFVQPLSQTEKVPKGVVVRPKGDHQEEASRVRAIPKPQSEKQKEEQRVETIPKLLNHQIDMSSLDVYAMPSPPPPPPLTTESVIVEPTSFHKGANFNPPKKSPAPTTFAKTFTIASLQQFTNSFCQDNLTGLGMLGSVYRAEFPDGKILAVKKLDKRVTDHQTDDEFLELINNIDRIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCQPPVVHRNFKSANILLDDDVSVRLSDCGLAPLIAKGSVSQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPQLHDIDALSKMVDPSLKGDYPAKALSNFADIISRCVQSEPEFRPAMSEVVLYLVNMIRKESQQSESNE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00842 802 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 97 784 - -
Spst5g00842 802 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 479 590 - -
Spst5g00842 802 Gene3D Phosphorylase Kinase; domain 1 483 590 - -
Spst5g00842 802 Pfam Protein tyrosine and serine/threonine kinase 520 785 IPR001245 GO:0004672|GO:0006468
Spst5g00842 802 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 58 284 - -
Spst5g00842 802 MobiDBLite consensus disorder prediction 284 330 - -
Spst5g00842 802 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 591 801 - -
Spst5g00842 802 Gene3D Transferase(Phosphotransferase) domain 1 591 802 - -
Spst5g00842 802 MobiDBLite consensus disorder prediction 284 311 - -
Spst5g00842 802 MobiDBLite consensus disorder prediction 409 437 - -
Spst5g00842 802 Gene3D Ribonuclease Inhibitor 59 192 IPR032675 -
Spst5g00842 802 Pfam Leucine rich repeat 172 230 IPR001611 GO:0005515
Spst5g00842 802 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Spst5g00842 802 SUPERFAMILY L domain-like 57 265 - -
Spst5g00842 802 ProSiteProfiles Protein kinase domain profile. 513 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00842 802 SUPERFAMILY Protein kinase-like (PK-like) 488 787 IPR011009 -
Spst5g00842 802 Gene3D Ribonuclease Inhibitor 193 280 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00842 Spst-Chr5 7733524 7738982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00842 47 798 Strubbelig Receptor Gene Family AT4G03390 59.766 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst5g00842 PK_Tyr_Ser-Thr 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00842 - - gmx:100811490 1303.12