Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00812 ATGGCTCATCGTACTCGTCATGATGTAGTGAAGACCTTAGAGCAGAGTGGAGTTTCTCCACTACCCTCACCTTCCCCAACCACTCTTCCCCTTACTTTCTTCGACGTTCAATATTTTTACTGTCACCCCTTCCAACGCATCTTCTTCTATGAGTTTCCCCACCCAACTCATCACTTCCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCACCACTTCTTCCCCTATGCCTCTAATCTCATCGTTCCACCGCAACCCCATCTCTCTCACATCCGTTACCTTCCTGGTGACTCTCTCTCCTTCACTGTTGCAGAGTCCACCGCAGATTTCACCCTCCTCACCTCCGATTCACCCCAAGACGTTCGAAACTGGCACCCTCTTGTTCCCACCTTGCCTTCCCCACGGGCTGAGCAAGATGGCATACGTGTGTTTCCTCTCATGGCCATTCAAGTCACGGTTTTCCCAAATTCTGGCTTCAGCATATGTCTTACCTTCAACCACCTTGCTGGGGATGGCAAATCACTTCATCATTTCGTCAAGTTTTGGGCTTCTCTTTGCAAGGCAGGAGGGGACTTCGCTTCCCTTGAAACCTCTTTGCCTCTTCCTTCACACGAGAAGGACAAAGTTTTAGATCCGAAGGGGCTTAAGCTCATTTACTTTCAAGAACTTGAACATGGTGAGTCGCAAAGCATGGAGTTTTCTGGGCTCGTGCGAGACCTTTCCACTAACAAGGTTCGCTTCACTGTTGTACTCACTCGTCAACAAATTGAGAAACTAAAGAAGTGGGTCTCTCTTAAATGTGCCAGCTACGATTCAGGGCTATTACACATATCAAGCTTTGTGGTGACATGCTCTTTGATTTGGATTTGTATGATTAGATCAGAGGAGAGCAAAAGCGATTCTTTATCACAACAGTCTGATGAATTTTGCCACTTGATGTTTCATGCAGATTGTCGTGATCGTCCTGAATTCTCACTATCTTCAACTTACTTCGGGAATTGTCTAGCCTCGTTCTTTGTGAGAATAAAGAGGAGTGAGCTAGTGAGAGAAAATGGTATTGTCGGTGCAGCAGAGGCTATTGAAAGGGAAATTAGATATTTCAAGAGTCATCCTTTCAGAGATGCTGAAACTCTGATGTCAGATTATATAGAGTTAGGAAAACCAGGTAAATCTGTGTTGATAATTGCGGGTTCACCAAAACTGGGTGTGTATCAGACTGATTTCGGTTGGGGAAAGCCCAAGAAATGTGCAGCAGCATATATTGAATCGTCAGGATCAATTTCTCTTTCTGATTGTAGAGAGGAAAAAGGAGGAATTGAGGTTGGATTGGCACTTGAAAGGACTCGGATGAGTAAGTTCACCAACCTCTTTGAAGAGAAACTCTGTGATATTAATATTTTAAGTGAACCTTAA 1428 0.4468 MAHRTRHDVVKTLEQSGVSPLPSPSPTTLPLTFFDVQYFYCHPFQRIFFYEFPHPTHHFLQTALPILKHSLSLSLHHFFPYASNLIVPPQPHLSHIRYLPGDSLSFTVAESTADFTLLTSDSPQDVRNWHPLVPTLPSPRAEQDGIRVFPLMAIQVTVFPNSGFSICLTFNHLAGDGKSLHHFVKFWASLCKAGGDFASLETSLPLPSHEKDKVLDPKGLKLIYFQELEHGESQSMEFSGLVRDLSTNKVRFTVVLTRQQIEKLKKWVSLKCASYDSGLLHISSFVVTCSLIWICMIRSEESKSDSLSQQSDEFCHLMFHADCRDRPEFSLSSTYFGNCLASFFVRIKRSELVRENGIVGAAEAIEREIRYFKSHPFRDAETLMSDYIELGKPGKSVLIIAGSPKLGVYQTDFGWGKPKKCAAAYIESSGSISLSDCREEKGGIEVGLALERTRMSKFTNLFEEKLCDINILSEP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00812 475 PANTHER - 10 466 - -
Spst5g00812 475 Gene3D - 246 468 IPR023213 -
Spst5g00812 475 Gene3D - 10 240 IPR023213 -
Spst5g00812 475 Pfam Transferase family 22 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00812 Spst-Chr5 7411832 7413259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00812 47 469 Monolignol Biosynthesis Gene Families AT5G48930 23.820 2.02e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00812 - - gmx:100797294 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00812 5 7411832 7413259 Spst5g00812 5 7411832 7413259 ECH