Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00811 ATGGCTAATCATATTAACATTCATGAGCCAGTGAAGATGTTAGAACAATGCCAAATTGCTCCACCATCTTCACTTCCCTCAACCACTCTTCCTCTTACTCTCTTCGACTTTCCTTTCTTTAACGCCGACCCCATCAAACGCATCTTCTTCTATGAGTTTCCCCACCCCACTCACCATTTCCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCTACACTTCTTCCCCTTTGCCTCCTATCTCATCGTTCAACCACAACCCCATCTCTCTCACATCCGTTACCTTCATGGCGATTCTCTCTCCTTCACCGTTGCAGAGTCCACCGCAGACTTCACTCTCCTCACCTCCGATTCACCTCAAGACGTTCGAAACTTTCACCCTCTTGTTCCCGCGTTGTCTCCCCCACGTGTTGAGCAAGATGGCACCCGTGTGTTCCCTCTCATGGCTATTCAAGTCACGGTCCTCCCAAATTCTGGCCTCGCCATATGTCTCACCGTCAACCATGTTGTTGGGGATGGCAAATCTCTTCATCATTTCGTCAAGTTTTGGGCTTCTCTTTGCAAGGCAGGAGGGGACTTGGCTTCCCTAGAAACCTCTTTGTCTCTTCCTTCGCATGAGCGGGACAGAATTAAAGACCCAAAAGGCCATAAGCTCCTTTTCTCCGAAATATTTGCGATTAGTGAACCAAAAAGAGAAAGAACTGAGTTCGCAGGGGTCAAGGATCGCTTCACTGTTGTATTGAGTCGTGAACAAACTGAGACATTAAAGAAATGGGTCTCTCTTAAATGTGGCATCTACGATTCCCGGGCATTACACATATCAACCTTTGTGGTAACATGCTCCTTGATTTGGGTTTGCATGGTTGTATCAGAGGAGAGCAAACAAGACTCTGATGAACTGTGCTACTTGTGGATTCCAGCTGATTCTCGTGATCGTCCTGAATTTTCGTTAACTTCAACGTACTTTGGGAACTGTCTAACCGCTTGCATGGTGGCAATTAAGAGGAGTGAGATAGTGGGAGAAAATGGGATCGTTGCAGTGGCAAATGGCATTGAAAGGGAAATTAGAGATTTCAAGAGTGATGCTTTGAGAAAGGCTGAAATGTTGGTGTCAGATTATAGAGAACATGTGAAACCTGGTAAATCTGTGTTGATAATTGCGGGGTCACCAAAACTGGGTGTATACCAAACTGATTTTGGATGGGGTAAGCCCAAGAAATGTGAAGCAGCACACGTTGAATCGTCAGAAGCAATTTCTCTTTCAGATTGTAGAGACGAAAAAGGTGGAATTGAGGTGGGATTGGCGCTGGAAAGAAATCGAATTGATAAGTTCACCAGCATCTTGGAAGACCATCTCAATAATATTAATAAATTCTGA 1392 0.4511 MANHINIHEPVKMLEQCQIAPPSSLPSTTLPLTLFDFPFFNADPIKRIFFYEFPHPTHHFLQTALPILKHSLSLSLLHFFPFASYLIVQPQPHLSHIRYLHGDSLSFTVAESTADFTLLTSDSPQDVRNFHPLVPALSPPRVEQDGTRVFPLMAIQVTVLPNSGLAICLTVNHVVGDGKSLHHFVKFWASLCKAGGDLASLETSLSLPSHERDRIKDPKGHKLLFSEIFAISEPKRERTEFAGVKDRFTVVLSREQTETLKKWVSLKCGIYDSRALHISTFVVTCSLIWVCMVVSEESKQDSDELCYLWIPADSRDRPEFSLTSTYFGNCLTACMVAIKRSEIVGENGIVAVANGIEREIRDFKSDALRKAEMLVSDYREHVKPGKSVLIIAGSPKLGVYQTDFGWGKPKKCEAAHVESSEAISLSDCRDEKGGIEVGLALERNRIDKFTSILEDHLNNINKF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00811 463 Gene3D - 7 235 IPR023213 -
Spst5g00811 463 PANTHER - 11 459 - -
Spst5g00811 463 Gene3D - 247 460 IPR023213 -
Spst5g00811 463 Pfam Transferase family 11 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00811 Spst-Chr5 7403377 7404768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00811 48 453 Monolignol Biosynthesis Gene Families AT5G48930 22.426 4.92e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00811 - - gmx:100797294 620.928