Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00810 ATGACAGAAATTAGATCACATAAACTTCTTGAGAAATCTCTAGTTGCTCCAGCATCACTTCCTAATAGTACAACAAGAACAACCTCTTCTCTTCCCCTCTCATTCCTTGATTTGCCTTTAGCGGGTCCTGTTTACGTGAAAAGACAATTCTTCCATCACTTTCCACACTCCACACACCATTTTTGTGAAACCACACTCCCCACTCTCAAATACTCTCTCTCTCTTATCCTTCAACACTTCTTTCCTCTAGCTGGAAATCTCTTTTGTCCTCCACCACCCCACAAACCCTTCATTCGCAACACCGATGATGACACTGTCACTTTAACCATCTATGAATCCAAAGCTGATTTCAACCATCTCTCATCCAACCACCCAAAGAGTCTCAAAGAATTGGATTACCTGTTTCCCAAGTTGACATTCACAACCATGCATGACGACACCTTCATTTTCCCTTTAGCGGCATTACAAGCCACGGTTTTCCAAAACCATGGCCTTTGCATCGCCCTCACATATTGTCATGTGATGGATGGCAAGAGTTGCAGTCATTTCATGAAGTCTTGGTCTTCCCTTTGTCAAAGTGGTGGAGTTGACTTGACACTTTTAGAGAAGTCACCACCGTGTTTTGATAGGGAAGTGTTGAAGGACCCTAGAGGACTCGAGGCTATTTTCTTGAGAGACTATTTCGAAGAGAGATCAACTTGGAAGGATAAGCTCATTGATGAAAATCCTACACATGTGTGTGATGATGAGGAACATTTTAAGGCAACGATTGTTTTTAGAAAAGATGATATTGAGGGCTTAAAAAGATGGGTTCTAGCACAGTGGAAGAAAAATTATGACTTGAACCCACCGCAATATCTGTCAAAATTTGTGGTTATTTGTGGTCTTGTGTGGGCTAGCTTGGTTAAAACCAGATGCAAAGATCATGATGACGAAGAAGATGATAAAGAAGAATACTTTCGTTTTGCCGCAGATTGCAGAGATCGCCTTGGTTATCCTATACCAGAAACATACTTTGGAAATTGCTTAACGCTATGTTATGCCATGCTTAAGAGAAATGAGCTTAAGGGGGAGGATGGTTTTGTGAATGCGGTCAAGGCAATTGAAAAGACAGTGAGTGATATGAAAAATGAACCCTTTAAAGATGCAGAACATTGGAGGGCATTTTTTATGAAGATGTTTGTCTTGGGAAATACGTTGCTAGTTACCGGGTCACCCAACTTCAAAGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTTGAAATGGTTCATTCCTCCAGGTGTATGTCTATAGCCGAAAGTAGAGAAGAGGAAGGAGGACTTGAGGTTGGTTTGGTGTGTAAAAGTACAGAGTTTCAATATTTATTTTCTGTCATTGAACAAGAACTAGAAACTACAAAACTCCAAGTCTATTAG 1425 0.4063 MTEIRSHKLLEKSLVAPASLPNSTTRTTSSLPLSFLDLPLAGPVYVKRQFFHHFPHSTHHFCETTLPTLKYSLSLILQHFFPLAGNLFCPPPPHKPFIRNTDDDTVTLTIYESKADFNHLSSNHPKSLKELDYLFPKLTFTTMHDDTFIFPLAALQATVFQNHGLCIALTYCHVMDGKSCSHFMKSWSSLCQSGGVDLTLLEKSPPCFDREVLKDPRGLEAIFLRDYFEERSTWKDKLIDENPTHVCDDEEHFKATIVFRKDDIEGLKRWVLAQWKKNYDLNPPQYLSKFVVICGLVWASLVKTRCKDHDDEEDDKEEYFRFAADCRDRLGYPIPETYFGNCLTLCYAMLKRNELKGEDGFVNAVKAIEKTVSDMKNEPFKDAEHWRAFFMKMFVLGNTLLVTGSPNFKVYETDFGFGRPTKVEMVHSSRCMSIAESREEEGGLEVGLVCKSTEFQYLFSVIEQELETTKLQVY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00810 474 Gene3D - 250 468 IPR023213 -
Spst5g00810 474 Gene3D - 7 239 IPR023213 -
Spst5g00810 474 Pfam Transferase family 22 454 - -
Spst5g00810 474 PANTHER - 8 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00810 Spst-Chr5 7398555 7399979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00810 22 420 Monolignol Biosynthesis Gene Families AT5G48930 22.782 9.51e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00810 - - var:108332870 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00810 5 7398555 7399979 Spst5g00810 5 7398555 7399979 ECH