Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00794 ATGACAAGGACATATAACACATGTTTGAAATCCAAGTACAAGTTATCTTTTAATTTTCCCTTGAAGTTGCTCTCGTACAACGAGATGAGGAACTCATGGTTGTGCATTTCTCTTCTCACCCTCTTCTTTTCTTTGTTCACCCACAATTCCCTTGCAGCTCTCACTACCGTTTCCGCAAACCAAACTCTCACTGGGGACCAAACCCTCGTCTCTGGAGGTGAAATCTTCGAACTGGGTTTCTTCAAGCCAGGTAATTCCTCTAACTACTATATAGGCATATGGTACAAAAAGGTCGCCAAACAAACGATTGTTTGGGTAGCAAATAGAGACAACCCTGTCTCTGATAAGAATACTGGCACGTTAGAAATATCAGGTGGTAATTTAGTTCTCTTAGATGGGTCTTCTAATCAAGTTTGGTCAACAAACATGACTTCTCCCAAGTCAGGTTCTGTCGTAGAAGCTGTTCTCCTAGATTCCGGGAATCTTGTGTTAAGAGATAGGCAGAATGGTGCTTCTGCTTCTTCAGACCCTTTGTGGCAGAGTTTTGATTACCCAACTGACACGTGGCTTCCGGGTGGCAAAATCAAACTGGACACTAAAACAAAGCAACCTCAATACCTCACTTCATGGAAGAACAAAGAAGATCCTGCGACGGGTCTTTTTTCTCTGGAATTAGACCCCAAAGGAACCACTTCTTATTTGATTCTTTGGAACAAGTCTGAACAGTACTGGACAAGTGGTCCTTGGAATGGCCACATTTTTAGTTTAGTTCCCGAGATGAGGGCGAACTTTCTATACAATTTTACGTTTGTGTCGAACGAGAACGAGAGCTATTTCACATACTCTATGTATAACTCTTCCATTATATCTCGATTTGTGATGGATGTCTCGGGGCAGGTCAAACAACTCTCGTGGTTGGAGAATGCTCAGCAGTGGAACTTGTTTTGGTCGCAGCCGAGACAACAGTGTGAGGTATATGCGTTTTGTGGCGCGTTTGGGATCTGCACTGAGAACTCGATGCCGTATTGTACTTGTTTGACGGGTTTTGGGCCAAAGTCAGTGTCTGATTGGAATCTGGAGGACCACTCAGGTGGGTGTGAAAGGAGAACCAAGTTACAGTGTGAGAATTCGGATCCCCCTAACGGGGATAAGGACGGGTTTCTTGCAATTCCCAACATGGCGTTACCTCAACATGCACAATCTGCAGGATCAGGGAATGCAGGGGAATGTGAATCAACTTGCTTGAACAACTGTTCCTGCACGGCTTATGCGTATGACACTCAAGGGTGTTTGATTTGGATTGACAACCTTGTGAATCTGCAGCAGCTATCTTTAGATGATACTGGCGGAAAAACTTTGTATCTCAAACTTGCAGCATCCGAGTTTCAAGATGATAAAAGCAGTAAGGGGACAATTATTGGTGTGGTTGTGGGAGTGGCTGTTGGAATTGGGATTCTCTTGGCCATTGTTTTGTTTTTCGTGATTAGGCGAAGGAAGAGAATGGTTGGAGCAGGAAAGCCTGTGGAGGGTTCATTGATCGCATTTGGGTACAGAGATTTGCAAAATGCAACGAGGAATTTCTCTGAGAAATTGGGAGGAGGAGGATTTGGTTCTGTTTTCAAAGGAACGTTGGGTGATGCAAGTGTTGTAGCAGTGAAAAAGTTGGAGAGTATTAGCCAAGGAGAGAAACAGTTCCGAACAGAAGTTAGCACAATCGGGACAGTGCAACATGTTAATCTTGTTAGGCTCCGTGGATTCTGCTCTGATGGTTCCAAAAAGCTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGGATTTCCATTTGTTCCACAACAAGAGCGATAAGGTGTTGGATTGGAAGATGAGATACCAAATTGCGTTGGGAACAGCAAGGGGATTAACTTACCTTCACGAGAAGTGTAGAGATTGTATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTAGATGCGGATTTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTATTGGAAGGGATTTCAGTAGGGTCCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATTACAACCAAAGCCGATGTGTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCGGGTAGGAGGAACTCTGAGCCATCAGAAGACGGCCAAGTTACCTTTTTTCCAACATTTGCGGTAAATGTTGTTATCCAAGGTGGCAGTGTTGCTAGGCTTTTGGACCCTGGTTTGGAGGGTAATGCTGAGATTGAGGAGGTGACTCGAATAATAAAAGTTGCTTCATGGTGTGTCCAGGACAATGAGGTTCACCGGCCAAGCATGGGTCAGGTGGTTCAAATCCTTGAGGGGATCTTGGATGTGAATTTGCCTCCAGTTCCGAGATCCCTTCAAGTGTTTGTTGACAGCCAGGAGAGTTTAATTTTCTACACTGAGTCAAACTCCACACAAAGTTCACAGGTGAAGAGCAACGTTTCAACGACCTCCTCCTCTCAAGCCAGAAGTAACATCTCTTCAGCAAGCTCCATGTCCTTTGGAGGAGAAAATTAG 2589 0.4442 MTRTYNTCLKSKYKLSFNFPLKLLSYNEMRNSWLCISLLTLFFSLFTHNSLAALTTVSANQTLTGDQTLVSGGEIFELGFFKPGNSSNYYIGIWYKKVAKQTIVWVANRDNPVSDKNTGTLEISGGNLVLLDGSSNQVWSTNMTSPKSGSVVEAVLLDSGNLVLRDRQNGASASSDPLWQSFDYPTDTWLPGGKIKLDTKTKQPQYLTSWKNKEDPATGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGHIFSLVPEMRANFLYNFTFVSNENESYFTYSMYNSSIISRFVMDVSGQVKQLSWLENAQQWNLFWSQPRQQCEVYAFCGAFGICTENSMPYCTCLTGFGPKSVSDWNLEDHSGGCERRTKLQCENSDPPNGDKDGFLAIPNMALPQHAQSAGSGNAGECESTCLNNCSCTAYAYDTQGCLIWIDNLVNLQQLSLDDTGGKTLYLKLAASEFQDDKSSKGTIIGVVVGVAVGIGILLAIVLFFVIRRRKRMVGAGKPVEGSLIAFGYRDLQNATRNFSEKLGGGGFGSVFKGTLGDASVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSDGSKKLLVYDYMPNGSLDFHLFHNKSDKVLDWKMRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFCPKVADFGLAKLIGRDFSRVLTTMRGTRGYLAPEWISGVAITTKADVYSYGMMLFEFVSGRRNSEPSEDGQVTFFPTFAVNVVIQGGSVARLLDPGLEGNAEIEEVTRIIKVASWCVQDNEVHRPSMGQVVQILEGILDVNLPPVPRSLQVFVDSQESLIFYTESNSTQSSQVKSNVSTTSSSQARSNISSASSMSFGGEN 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00794 862 ProSiteProfiles PAN/Apple domain profile. 374 458 IPR003609 -
Spst5g00794 862 FunFam Receptor-like protein kinase 4 493 599 - -
Spst5g00794 862 FunFam Serine/threonine-protein kinase 49 182 - -
Spst5g00794 862 ProSiteProfiles Bulb-type lectin domain profile. 54 177 IPR001480 -
Spst5g00794 862 SMART serkin_6 525 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00794 862 SMART ntp_6 382 457 IPR003609 -
Spst5g00794 862 PANTHER OS07G0415500 PROTEIN 33 807 - -
Spst5g00794 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Spst5g00794 862 MobiDBLite consensus disorder prediction 832 862 - -
Spst5g00794 862 Gene3D Phosphorylase Kinase; domain 1 493 599 - -
Spst5g00794 862 CDD STKc_IRAK 531 798 - -
Spst5g00794 862 CDD B_lectin 60 185 IPR001480 -
Spst5g00794 862 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Spst5g00794 862 CDD PAN_AP_plant 370 458 - -
Spst5g00794 862 Gene3D - 51 182 IPR036426 -
Spst5g00794 862 SUPERFAMILY Protein kinase-like (PK-like) 511 825 IPR011009 -
Spst5g00794 862 Pfam D-mannose binding lectin 102 211 IPR001480 -
Spst5g00794 862 ProSiteProfiles Protein kinase domain profile. 525 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00794 862 Pfam S-locus glycoprotein domain 244 353 IPR000858 GO:0048544
Spst5g00794 862 FunFam Serine/threonine-protein kinase 600 803 - -
Spst5g00794 862 Gene3D Transferase(Phosphotransferase) domain 1 600 803 - -
Spst5g00794 862 Pfam PAN-like domain 382 440 IPR003609 -
Spst5g00794 862 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 250 IPR036426 -
Spst5g00794 862 SMART blect_4 60 185 IPR001480 -
Spst5g00794 862 Pfam Protein kinase domain 528 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00794 862 PIRSF SRK 27 847 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00794 Spst-Chr5 7161195 7163909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00794 481 805 Receptor kinase-like Gene Family AT5G20050 42.500 1.09e-80 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst5g00794 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00794 - - gmx:100810583 1309.66