Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00792 ATGGGTTTAGAGATGAAAAACTGCGAGCTGTGCAAGGTTCCGGCTCGGACCTTCTGCGAGTCGGACCAGGCCAGCTTATGCTGGGACTGCGACGCCAAGGTCCACGGTGCCAACTTCCTCGTCGCCAGACACACGCGCACGCTCCTCTGTCACGCATGCCAGTCACTCACGCCCTGGAAGGCCTCCGGCGCGGCCCTCGGCAATACCGTCTCCCTCTGCGAGAGGTGTGCCGGAGGAACAGCCGAACAAGGTCAGGAGAGCCAAGGAGGCAATGACGACGACTTAGACACAGACGAAGAGGATGACTACGACGATGATGACACCGACGACGAGGTCGCCGCCGACGAGGACGGAGACAACCAGGTTGTACCTTGGTCCTCCTCGCCTCCGCCGCCGCCACCCGCCCCGAGCTCTTCCAGCAGCGAAGAGTCGGTTAGCCGGTGCAACAACGTCTACGAGGATGTTTCAACCACATTGAAAAGACGTCGCAAGAACAATGATTTGGAGAATTTGAATGCGAATAATTGGGGACTTCAACGAAGCGAAGTGGACAGAGGAGGTTGGTTGGTTCGGTTGCGGCGGCGAACCGCCCTGGAAGGTGACGGTGTTGCGGTGGAGCGACGGAGTGGTAGGGCGGTGATTCCCTACGGTTGCGATGACGATGATAGAGCCTCTGAAATTTGA 684 0.5877 MGLEMKNCELCKVPARTFCESDQASLCWDCDAKVHGANFLVARHTRTLLCHACQSLTPWKASGAALGNTVSLCERCAGGTAEQGQESQGGNDDDLDTDEEDDYDDDDTDDEVAADEDGDNQVVPWSSSPPPPPPAPSSSSSEESVSRCNNVYEDVSTTLKRRRKNNDLENLNANNWGLQRSEVDRGGWLVRLRRRTALEGDGVAVERRSGRAVIPYGCDDDDRASEI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00792 227 SMART bboxneu5 3 49 IPR000315 GO:0008270
Spst5g00792 227 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 163 - -
Spst5g00792 227 CDD Bbox1_BBX-like 8 49 - -
Spst5g00792 227 Pfam B-box zinc finger 5 47 IPR000315 GO:0008270
Spst5g00792 227 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
Spst5g00792 227 MobiDBLite consensus disorder prediction 80 148 - -
Spst5g00792 227 MobiDBLite consensus disorder prediction 89 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00792 Spst-Chr5 7138536 7139387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00792 6 133 C2C2-CO-like Transcription Factor Family AT4G27310 48.148 2.47e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst5g00792 zf-B_box 5.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00792 - - gmx:100801024 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00792 5 7138536 7139387 Spst5g00792 5 7138536 7139387 ECH