Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00790 ATGAGGATTGATGAGGTTGTGCTGTCCTTCTCCCTTCTTCTCTCTTTGCCGCTATGCTTCCAAATATGTTTCGCTGGAGATACTTCGAACGCTGCCCAGAACATAACTCAGCTCTCCGGAGGGAACCTTGTTTCATCAAACAGCACATTTGAGCTGGGCTTCTTTTCTCCAGATGTCCAAAATGGTGACAAAAGATACTTAGGGATTTGGTATCACGGGCTGGAACCACAAACAGTGGTGTGGGTTGCCAACAGAGATGATCCTGTTGCAGATTCCAGAGGAGTTTTTCGAATTGCTGAGGATGGAAATGCGGTGGTAGAAGATGCATCAAAAAGGCATTGGTCGTCGGGACTTGAAGCATCCCCGTCCACAAACAGAACATTGAAGCTCCTGGATTCAGGGAACCTAGTACTGATAGACGACTCTGGAACGAGTTACCTGTGGCAGAGCTTCCAACACCCAACAGACACGTTTCTTCGTGGCATGAAAATGGATGCAAATTTAACGTTGACTTGTTGGAGGGACGCCACTGACCCAGCACCCGGCGACTACGTCTTCAAGCTGGGTCCTAGTCGAAACTTGGTAGTGAAAGAGCAATCACAACTTCACTGGACAGAGTCACTCGAAGAACTCGATGCAAGGATCTCTAGGTTTTTGGCCATCGCCAGGTATTCAAGTAACATCTCGCAACCTCACATTGACGTAAAATCAAGGCTATTAATGGATTCTAGCGGAGAGATACAGTTTCTGAAGTGGGACGAGGAAGATACACAATGGGTTAAACGCTGGTCGGGGCCAGATGGCAAATGCGAGGTATATAACCATTGCGGGAGCTTCGGGGTCTGTTACGAAAATAATTTGAATTTGCCTGAATGCAAATGTTTACCAGGATTCAAACCCAAGGATGGAGAAGGCAAAGGGTGTGTCAGAAAATCAACATCTTCTATAGACACGGATGTGACGTTCCTGAACTTAACCAACATACGAGTGGGTGACCCAGACAAAACATTCGACCCCAGAACACAAGCAGAATGTCAATCCTTATGCCTTAACAATACCAGGTGCCAGGCATATTCATTTAAACAAAAAATTCCTTCTAGAACGTCAGACGATAGTGATTACGTTAATACATGCAAAATTTGGACTCAAAATTTATCAACTCTCTCAGAGGATCATGATCGTGGTAATCTTTCTGTCCTGGTTAAGAGATCAGATATAGCAGCAACTGCAAAATCGTGTGAACCTTGCAGCACATACGAGATTCCTTATCCGCTAAGCACTGGGCCAAACTGTGGAGATCCTACGTACAACAAGTTCAATTGTAATGAATCGATGGGCCACGTTAGCTTCACGATGCCTGGAGGAATATCATACCAAGTTACTTGGATAGATGAAGACACCAGAATGTTTTACATTGAAACAAATGATTCAGATTTCTGTGTTTCCAGAAATCAAAGTAACACACCTAAATTCCCGTTTAATATGTCAGAGTGTTCTAAAAATGATGATAATGATGGAATGATTAAAATCAATTGGGCACCAGCACCAGAACCGCCCTGTAGGAAGCCCACAGACTGCGAGAATTGGCCCCATTCGACATGCAGAAAAGGAGAAAACAGAAAGAGAAAAGCTCATAAGCTTGACGGGGCAAGTAGTCAAATTCAGCAGAGCTTGTACGAGAGTGAAAGACATGTGAAAGGTTTGATTGGCTTAGGAAGATTAGAAGAAAAAGACATTGAAGGAATTGAAGTGCCCTGTTATACTTTTGCAAGCATTCTAGCAGCTACAGACAATTTCTCAGAGTCTAACAAGCTTGGAAAAGGAGGTTATGGACCTGTATATAAGGGAACGTTTTTTGGAGGTCATGATATAGCTGTAAAGAGACTTTCAAATGTTTCCACTCAAGGCTTACAAGAATTCAAAAATGATCATGAGGTTATTCTAATTGCCAAACTTCAACACCGGAACCTAGTTAGACTCAGAGGCTATTGCATAAAAGGAGATGAAAAGATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCGTTTATATTTGGTTAG 2067 0.4296 MRIDEVVLSFSLLLSLPLCFQICFAGDTSNAAQNITQLSGGNLVSSNSTFELGFFSPDVQNGDKRYLGIWYHGLEPQTVVWVANRDDPVADSRGVFRIAEDGNAVVEDASKRHWSSGLEASPSTNRTLKLLDSGNLVLIDDSGTSYLWQSFQHPTDTFLRGMKMDANLTLTCWRDATDPAPGDYVFKLGPSRNLVVKEQSQLHWTESLEELDARISRFLAIARYSSNISQPHIDVKSRLLMDSSGEIQFLKWDEEDTQWVKRWSGPDGKCEVYNHCGSFGVCYENNLNLPECKCLPGFKPKDGEGKGCVRKSTSSIDTDVTFLNLTNIRVGDPDKTFDPRTQAECQSLCLNNTRCQAYSFKQKIPSRTSDDSDYVNTCKIWTQNLSTLSEDHDRGNLSVLVKRSDIAATAKSCEPCSTYEIPYPLSTGPNCGDPTYNKFNCNESMGHVSFTMPGGISYQVTWIDEDTRMFYIETNDSDFCVSRNQSNTPKFPFNMSECSKNDDNDGMIKINWAPAPEPPCRKPTDCENWPHSTCRKGENRKRKAHKLDGASSQIQQSLYESERHVKGLIGLGRLEEKDIEGIEVPCYTFASILAATDNFSESNKLGKGGYGPVYKGTFFGGHDIAVKRLSNVSTQGLQEFKNDHEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00790 688 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 686 - -
Spst5g00790 688 Pfam S-locus glycoprotein domain 234 301 IPR000858 GO:0048544
Spst5g00790 688 Pfam PAN-like domain 321 386 IPR003609 -
Spst5g00790 688 Gene3D Phosphorylase Kinase; domain 1 573 676 - -
Spst5g00790 688 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 566 676 - -
Spst5g00790 688 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Spst5g00790 688 Gene3D - 24 152 IPR036426 -
Spst5g00790 688 ProSiteProfiles EGF-like domain profile. 266 304 IPR000742 -
Spst5g00790 688 Pfam Protein tyrosine and serine/threonine kinase 602 686 IPR001245 GO:0004672|GO:0006468
Spst5g00790 688 FunFam Receptor-like serine/threonine-protein kinase SD1-8 21 151 - -
Spst5g00790 688 SMART blect_4 34 154 IPR001480 -
Spst5g00790 688 SUPERFAMILY Protein kinase-like (PK-like) 582 687 IPR011009 -
Spst5g00790 688 MobiDBLite consensus disorder prediction 531 553 - -
Spst5g00790 688 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 178 IPR036426 -
Spst5g00790 688 CDD B_lectin 38 154 IPR001480 -
Spst5g00790 688 ProSiteProfiles Protein kinase domain profile. 599 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00790 688 Pfam D-mannose binding lectin 78 168 IPR001480 -
Spst5g00790 688 ProSiteProfiles PAN/Apple domain profile. 308 404 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00790 Spst-Chr5 7122541 7127688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00790 574 687 Receptor kinase-like Gene Family AT4G05200 58.772 1.93e-34 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g00790 PK_Tyr_Ser-Thr 8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00790 - - vun:114184726 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00790 5 7122541 7127688 Spst5g00790 5 7122541 7127688 ECH