Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00763 ATGGCTGAAATTTTCTTCCACAAGCAAGTCCACGTCAGCAAAGAATCTATTTTCAGACCTTTGCTCTTGACACATTCTGCTCGTCTCTGCTTGAATTGCGATGGCTGTGTGCACTCTGCAAATGCTTTGTCCCGCAGGCATTCACGTTCCCTCCTTTGCGATAAGTGCAATTCCCAGTCAGCAATGATACGTTGTATGGATCATAAGTTGTCTTTGTGTCAGGGTTGTGACTGGAGCCCGAATGACTGTTCTGCATTGGGACATAGGCGCCGCACGTTGAACGGATATAATGGGTGTCCTTCATTGGCTGAGTTTTCTAGAATCTGGTCCTTTGTGTTTGATGTTAATTCCTCACATGGTGGTTGGGAATCTATTGGTACTTTACCAAAAGGTGAGACTAGCCCGTGTTTGGAGCAACCTGATCATAATGGTGGTTCCTTTGGTTTGGTGAGTGATAAGTTGAATGAAATTGAACCTTGGATGGGGCAATCTCACATCATTCCCTCAAACCCAAATTACAACACACCGTACAGCAAAGAAGAAGCATTTTTTCTTCCTCGAGACTCAAACCAGCCAAAGGTGAGGATGAGTGAGGCTGGTGCGGTCTATACGATTAAGCCGCAGGAGTGTACTGATCTAGGAATACGTGATGGAAATGGACTCTGTGAAGGTCTCAATGTGGATAACGTTCCAACAAATTTAGGAAGTGCTGATGAAATATTTGGCTGTTCACAAGCTCCCACAGGATACCACCTTCAAGATAGAGGAATGGACTGTCTATTGATGGATAAAAACATATCAGTCACAGAATCTAGTTCACTTATTGAGAGTGCCTTAGAGGCATCATCATCAATTCAACAAGATTGTATGACTTTTCAGTCATCTACGCCTGGTGGATCAGCTAGTGCGGTGCAGGTTATGAACAGTAACACAAATTGTGCACTTATGAATCCTAGCTGCAGTGGAAACATCAATCTGGGATTTCATCAGGGTCAAGTTCATTCAAACATACCTCTTCAATTAGCCAACATTGTGGGTGAAAATAGTTCTACTGAATATCAAGACTGTGGGATATCGACAATGTTTCTGCCAGGTGAATTTCCCTGGGAATCAAATTTGGAGGGTACAAGCCCACAGGCAAGGGATAAAGCTAAAATGAGATACAATGAGAAAAAGAAAACACGAACGTTTGGCAAGCAAATAAGATATGCATCTCGTAAAGCAAGGGCTGACACAAGAAAACGTGTGAAAGGTAGATTTGTTAAAGCAGGTGAAGCATATGATTATGACCCTCTTGTGACAAAGGACGTCTAA 1314 0.4285 MAEIFFHKQVHVSKESIFRPLLLTHSARLCLNCDGCVHSANALSRRHSRSLLCDKCNSQSAMIRCMDHKLSLCQGCDWSPNDCSALGHRRRTLNGYNGCPSLAEFSRIWSFVFDVNSSHGGWESIGTLPKGETSPCLEQPDHNGGSFGLVSDKLNEIEPWMGQSHIIPSNPNYNTPYSKEEAFFLPRDSNQPKVRMSEAGAVYTIKPQECTDLGIRDGNGLCEGLNVDNVPTNLGSADEIFGCSQAPTGYHLQDRGMDCLLMDKNISVTESSSLIESALEASSSIQQDCMTFQSSTPGGSASAVQVMNSNTNCALMNPSCSGNINLGFHQGQVHSNIPLQLANIVGENSSTEYQDCGISTMFLPGEFPWESNLEGTSPQARDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTKDV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00763 437 ProSiteProfiles Zinc finger B-box type profile. 48 93 IPR000315 GO:0008270
Spst5g00763 437 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 426 - -
Spst5g00763 437 ProSiteProfiles CCT domain profile. 381 423 IPR010402 GO:0005515
Spst5g00763 437 Pfam CCT motif 381 423 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00763 Spst-Chr5 6685289 6688479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00763 27 431 C2C2-CO-like Transcription Factor Family AT3G21880 42.718 4.94e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst5g00763 CCT 1.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00763 - - gmx:100804738 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00763 5 6685289 6688479 Spst5g00763 5 6685289 6688479 ECH