Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00723 ATGGAGTGGACTAGAGGCCTCATCATAGGACGTGGCTCATCAGCCACCGTCTACACCGCCACCTCTTCCTACTCCTCCACCGTTTCCGCCGTCAAGACTGCAATGCTATCACCATCAAACGCGGAGCAGCTGCAGAGAGAACAGAGGATTATGTCTTCTCTGTTTTCTCCCCACATAGTTGCCTACGAAGGTTGTAAAACTACAGAGGAAAACAACACCCTTTGGTTCAACCTCTTCATGGAGTACATGCCATTTGGCACTCTCTCTCAGGAAATTCGCCGGCACGGTGGCCGGCTCACCGAGGCGAGCATCGTGCACTACGTGCGACAAGTCCTGCAGGGGCTAGAGTACTTGCACAATAAGGGTGTTGTGCATTGTGATATTAAAGGTAGCAACATTTTGATTGGTGAAGGTGGAGCCAAGATTGGGGATTTTGGATGTGCTAAGTTGTTGAATGAGTCTCCGTTGCCGACGATAGGCGGCACGCCAATGTTCATGGCACCAGAGGTGGCGCGTGGGGAGGAGCAGGGGTACCCTGCTGATGTATGGGCGCTTGGGTGCACTGTGGTTGAAATGGCCTCTGGGTTTGCACCGTGGCCTAATTTGGAAGACCCTGTCACAGTGTTGTACCGCGTTGCATATTCCAATGAGGTTCCTGAGATTCCAAGTTTTCTATCTGAAGAAGCAAAGGATTTCTTGGGCAAGTGTTTTAGGAGGAATCCGAAAGAGAGATGGACTTGTAGTCAACTTCTGAAGCATCCGTTTCTTGGGGAATTCATTTCCAATGATAAGGAAATTGAGCAATCTAAATCATGTTCTCCAACTAGTATTCTTGAGCAGGGCTTTTGGAATTCTGTGGAAGAGGCAGAGTGTGCCTCTGACCCCGGCAATGTGGTTCAGATTAAAAGTTCAGAGGAATCTCCCAAGGGTAGGATCAGAAGGCTAGCTTTGTGTTCAGAGGATCCAACTTGGGAATTGGATGAAGAAAATTGGATCACAACTAGGGGCAGTGAAGCAGGGGCTTCAAGTTTGGCTATGAATGTTAATAGTAGAATTAGTAGTGATTATTTTTGTGATGATCATTATGAATGTAGGGATGTTAGTGTTGTAGTTGATAGTTTCAATTTTGAGGGAGGCATTGGTGAGTCGCTTCTCCCTTCAACATTTGATTTTTTATAA 1179 0.4707 MEWTRGLIIGRGSSATVYTATSSYSSTVSAVKTAMLSPSNAEQLQREQRIMSSLFSPHIVAYEGCKTTEENNTLWFNLFMEYMPFGTLSQEIRRHGGRLTEASIVHYVRQVLQGLEYLHNKGVVHCDIKGSNILIGEGGAKIGDFGCAKLLNESPLPTIGGTPMFMAPEVARGEEQGYPADVWALGCTVVEMASGFAPWPNLEDPVTVLYRVAYSNEVPEIPSFLSEEAKDFLGKCFRRNPKERWTCSQLLKHPFLGEFISNDKEIEQSKSCSPTSILEQGFWNSVEEAECASDPGNVVQIKSSEESPKGRIRRLALCSEDPTWELDEENWITTRGSEAGASSLAMNVNSRISSDYFCDDHYECRDVSVVVDSFNFEGGIGESLLPSTFDFL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00723 392 SUPERFAMILY Protein kinase-like (PK-like) 6 270 IPR011009 -
Spst5g00723 392 FunFam Mitogen-activated protein kinase kinase kinase 17 2 311 - -
Spst5g00723 392 Gene3D Transferase(Phosphotransferase) domain 1 2 308 - -
Spst5g00723 392 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00723 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Spst5g00723 392 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00723 392 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Spst5g00723 392 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 337 - -
Spst5g00723 392 CDD STKc_MAPKKK 2 256 - -
Spst5g00723 392 Pfam Protein kinase domain 8 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00723 Spst-Chr5 6264390 6265568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00723 1 335 MAP Kinase Kinase Kinase AT1G05100 49.275 2.41e-105 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst5g00723 Pkinase 8.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00723 K20716 - gmx:100797801 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00723 5 6264390 6265568 Spst6g01205 6 11042786 11046969 ECH
Spst5g00723 5 6264390 6265568 Spst5g00723 5 6264390 6265568 ECH
Spst5g00723 5 6264390 6265568 Spst3g03236 3 82359403 82360332 ECH
Spst5g00723 5 6264390 6265568 Spst11g01119 11 35522432 35523529 PCT