Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00714 ATGTCATTGCCACCGCCGTCGCTGGTAACGGCGGCCACTGCGACGGACCTCCCGATCAGGCAGATTCCTGGAAGCTACGGATTCCCCTTGCTTGGCTCCTTGTCGGATCGACTCGACTACTTCTGGTTCCAGAAGCCGGAGAGCTTCTTCAGGAAGCGAATTGAGAAGTACAAGAGCACGGTCTTCCGCACCAATGTTCCTCCCTCCTTTCCCTTCTTCGCCAACGTTAATCCTAACGTCATCGCACTTCTCGATGTCAAATCCTTCTCCCACCTCTTTGACATGGACCTCGTCGACAAGAAGAACGTTCTCGTAGGAGACTTTGTCCCCGACGTCGCTTTCACCGGAAATATCAGGGTCAGCGTTTACCAGGACACCACCGAACCTCAACATTCGAAGGTGAAGGGCTACATAATGGATATCCTGAAACGAAGCTCGGGCATATGGGTATCTGAACTAGTGTCGAACCTAGACATAATGTGGGACAGCATCGAAGCAACACTCTCGAAATCTTCATCTGCGCCCTATATCTTCCCTTTACAACAATTTCTCTTCACCTTCCTCTGCAAAGTCCTCGCAGGTGCAGACCCTTCACGTGACCCCAAAATCGCAGATTCAGGCTATGCAATGCTTGATCGATGGCTTGCCCTTCAGCTCCTCCCCACTGTCAGCATCGGCATACTCCAACCTCTTGAAGAAATCTTCCTCCATTCCTTTGCCTACCCTTTCTTTCTCGTTAGTGGAGACTACAACAACATTTATAACTTCGTCAAGCAACAAGGCAAGGAAACCATAAACAGAGGCGAAATCGGGTTCGGGTTGACCCAAGAAGAGGCAATCCACAACTTAATCTTCGTGCTAGGGTTCAACTCCTTCGGCGGCTTTTCCGTTTTCCTTCCAACTTTGATTGATGCCATAGCGAGCAACTCCGCCTTGCAAGAGAAGCTGAAGAATGAAGCGAGGGAAAACGGCGGCTCAACGCTGACCTTTGACTCCATCAAACAGATGCCACTCATCCAATCGGTGGTCTACGAAACGCTGCGTATGAACCCTCCGGTTCCGCTGCAGTACGGTCGCGCCCGAACGGACTTCCGTTTGACTTCTCACGACTCCGTTTTCGACGTGAAGAAGGGGGAGTTGCTATGCGGCTTCCAGAAGCTCGTGATGAGAGACTCTCTCATCTTCGACGAACCGGACCGCTTCAAGCCGGACCGGTTCACTGGGGAGAAAGGGGCTCAGTTGCTGGACTACTTGTACTGGTCCAATGGGCCTCAAAGTGCGTCGTCCACTCTGTCCAATAAACAGTGCGCCGGGAAAGAGGTTGTGACCCTCACCGCGGCCTTGATTGTGGCTTACTTGCTTCGCAGGTATGATTCCATCATCGGCGATGCCAGTTCCATCACTACCCTTCAAAAGGCCAACTGA 1425 0.5186 MSLPPPSLVTAATATDLPIRQIPGSYGFPLLGSLSDRLDYFWFQKPESFFRKRIEKYKSTVFRTNVPPSFPFFANVNPNVIALLDVKSFSHLFDMDLVDKKNVLVGDFVPDVAFTGNIRVSVYQDTTEPQHSKVKGYIMDILKRSSGIWVSELVSNLDIMWDSIEATLSKSSSAPYIFPLQQFLFTFLCKVLAGADPSRDPKIADSGYAMLDRWLALQLLPTVSIGILQPLEEIFLHSFAYPFFLVSGDYNNIYNFVKQQGKETINRGEIGFGLTQEEAIHNLIFVLGFNSFGGFSVFLPTLIDAIASNSALQEKLKNEARENGGSTLTFDSIKQMPLIQSVVYETLRMNPPVPLQYGRARTDFRLTSHDSVFDVKKGELLCGFQKLVMRDSLIFDEPDRFKPDRFTGEKGAQLLDYLYWSNGPQSASSTLSNKQCAGKEVVTLTAALIVAYLLRRYDSIIGDASSITTLQKAN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00714 474 FunFam Allene oxide synthase, chloroplastic 17 474 - -
Spst5g00714 474 CDD CYP74 51 469 - -
Spst5g00714 474 PANTHER CYTOCHROME P450 26 17 457 - -
Spst5g00714 474 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g00714 474 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g00714 474 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g00714 474 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g00714 474 SUPERFAMILY Cytochrome P450 18 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g00714 474 Gene3D Cytochrome P450 17 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g00714 474 Pfam Cytochrome P450 305 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00714 Spst-Chr5 6187849 6191618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00714 95 473 Cytochrome P450 AT4G15440 56.658 2.84e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00714 K10528 - gmx:100784395 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00714 5 6187849 6191618 Spst5g00714 5 6187849 6191618 ECH