Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00699 ATGGATCCCTTCATCCACAAGCTCCGTCGCCACCTTCTCGCATGGCTTCACCGATCTCGCTCCGGTGCGGTGTTTTTTCTGCGGAGAATTTCGTATAAGGAAGTTCGAAGAGCAACGGATGGCTTCCACAGAGTCGTTTATAGCAATTCCGATGTATCTGCGTATGCTGCCAGGTTTGGAGACGGTGGCGGCGTTTGTTTGGTGAGAGAAGTGAAAGGTTTTAACGAAGAAAACGATCATTTTTACAGACACGTACAGTTCTTGGGACGATTGCGTCATCGCCACCTTCTCTCTCTCAAAGGCTTTTCCGTCGGACGCAATCACAAGAGATTGCTCATATTTGACAACATAGAAAATGGAAGCTTGAAGGATCATCTAAATGACCCTTTGAAGACTCCCTTAGATTGGAGGACAAGGTTACAAATAGCCAACGGGGTTGTGGCTGCACTGGAATATTTGTTTCTCTTCAGTGAACCACCTGTATGTCATGTCTCTATCACCTCAAGCAATATTATGTTAGATGAGAATTTCACAGCCAAACTATCTGACTTTGGCCTTCTTCCATCGGGTGGAAATTCTGTTATGATGCCATATTCAGAAGATTGCTTGAAGCAGAAAAGTTGTAGGATTATATTCCAACTTGGAGTGCTCATACTAGAACTGGTTACCGGTCAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATCCAAGAATCACGATTTTACAATTCCATTGATAAGATGATAGACCCTAATCTTGGTAACAATTATGACTGTACGGAGCTTAAAAGTCTTCTTGCTGTGGCAAAACTATGTATCAAATCATGGGACAAGCCCTCATTTACAATTCCTCAGTTATTCCGGCATCTCCAAAAGAAGATTGATATTACCCATGAATAG 906 0.4272 MDPFIHKLRRHLLAWLHRSRSGAVFFLRRISYKEVRRATDGFHRVVYSNSDVSAYAARFGDGGGVCLVREVKGFNEENDHFYRHVQFLGRLRHRHLLSLKGFSVGRNHKRLLIFDNIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLPSGGNSVMMPYSEDCLKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPNLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQKKIDITHE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00699 301 FunFam probable receptor-like protein kinase At1g49730 211 300 - -
Spst5g00699 301 PANTHER OS01G0253100 PROTEIN 27 296 - -
Spst5g00699 301 Gene3D Transferase(Phosphotransferase) domain 1 117 201 - -
Spst5g00699 301 Gene3D Transferase(Phosphotransferase) domain 1 211 300 - -
Spst5g00699 301 FunFam Protein kinase superfamily protein 16 115 - -
Spst5g00699 301 FunFam Protein kinase superfamily protein 117 207 - -
Spst5g00699 301 Gene3D Phosphorylase Kinase; domain 1 17 115 - -
Spst5g00699 301 Pfam Protein tyrosine and serine/threonine kinase 75 188 IPR001245 GO:0004672|GO:0006468
Spst5g00699 301 ProSiteProfiles Protein kinase domain profile. 32 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00699 301 SUPERFAMILY Protein kinase-like (PK-like) 24 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00699 Spst-Chr5 6054946 6057862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00699 22 300 Receptor kinase-like Gene Family AT3G19300 37.582 3.89e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Spst5g00699 PK_Tyr_Ser-Thr 4.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00699 - - gmx:100791979 557.37