Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00697 ATGCTGAATTTTAGCTCTGTGACAATATCTCTTGCTATGACTTTCAGGTTTGGTGGAATAGTTAAAGCTTCGAAACTCAGAGATAAATTTGTGGTGACTATGGGTGTCTCAGGGAAGTGGATTAAAGCACTGATTGGTTTAAAGAAATCAGAAAAGCCAGAGTCTTCTGAGAAGGACGGAAATAAGGTTGGCAAGTTTCATCATCAAAGAAGGCATGCTGTTGAATTTGATAATGGTAAACTTCCAAACGAATTGGATAGTGAAGTTATTCCACCTGTTGGTGATGATAATGGCCATGCAAACCTTGATGCCCATTATTCATCTTCTTCTTCACAACAAGCACTTGATGCTGCACATGATCAACAGATGAGGGAGGAAAGAGCTGCAATACACATTCAAACAGCATTTCGAGGATTTCTGGCTAGAAGAGCATTACGGGCTTTGAAAGGTGTGGTAAGGCTCCAGGCCCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTTGCATGGCATTGGAAACTCAAGCAACACAACAGAAACTTCAGCAAAACCTTGCAACTGATGCTCGAGTACGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCAGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAGCAGCCAGTTTCCTCTGGATTTGAACCAGATAAAAGTAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCCGTTCGTCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAATGGTGCATGAAAATGAAGCAAAGGATGGTAAAAGTGGAACTACGCATCAGTTGAGCTCTGCTAACAAGAAACCATGCTCATCAAACGCTCATCCAAACCCGGAAAATCATGGAACTGGTCCCACTATTTCTGATGAGTGTGATTCTTCACCTAGTAAGTCTGCTGGTTTGCTAGAATCATCAAAAACACAGCCTGTTAAGCCAATTTCAAAGGCAAATGTTGAAAATACTGCTGAAGAAGTTAACTCAAAACCTAGAATTGGGTCAAGATCTCACAGTAATCCAAAGGAGAGAACATCACAGGCAGATAAGCAGGCAAAAAAGCGATTATCTCTGCCTAACAATGGGGGTGGTGCAGGATCTCAAATAGTCAAACACCCTATTAGCACAACTAACGTCAAAGGGACGCTAAGCACACAAAAGTCTGGTAGGGATAAGCCTAAGCTAAATGGAAAAAGGGATGTGAATACAAAATCAGATTCATAG 1392 0.4282 MLNFSSVTISLAMTFRFGGIVKASKLRDKFVVTMGVSGKWIKALIGLKKSEKPESSEKDGNKVGKFHHQRRHAVEFDNGKLPNELDSEVIPPVGDDNGHANLDAHYSSSSSQQALDAAHDQQMREERAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQATQQKLQQNLATDARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVMVHENEAKDGKSGTTHQLSSANKKPCSSNAHPNPENHGTGPTISDECDSSPSKSAGLLESSKTQPVKPISKANVENTAEEVNSKPRIGSRSHSNPKERTSQADKQAKKRLSLPNNGGGAGSQIVKHPISTTNVKGTLSTQKSGRDKPKLNGKRDVNTKSDS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00697 463 Gene3D - 122 167 - -
Spst5g00697 463 MobiDBLite consensus disorder prediction 308 463 - -
Spst5g00697 463 Pfam IQ calmodulin-binding motif 126 146 IPR000048 GO:0005515
Spst5g00697 463 Pfam IQ calmodulin-binding motif 149 166 IPR000048 GO:0005515
Spst5g00697 463 MobiDBLite consensus disorder prediction 447 463 - -
Spst5g00697 463 MobiDBLite consensus disorder prediction 314 391 - -
Spst5g00697 463 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Spst5g00697 463 MobiDBLite consensus disorder prediction 102 118 - -
Spst5g00697 463 PANTHER IQ-DOMAIN 5-RELATED 34 420 - -
Spst5g00697 463 MobiDBLite consensus disorder prediction 426 446 - -
Spst5g00697 463 SMART iq_5 147 168 IPR000048 GO:0005515
Spst5g00697 463 SMART iq_5 124 146 IPR000048 GO:0005515
Spst5g00697 463 MobiDBLite consensus disorder prediction 96 118 - -
Spst5g00697 463 MobiDBLite consensus disorder prediction 392 407 - -
Spst5g00697 463 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00697 Spst-Chr5 6039365 6045298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00697 34 427 IQD Protein Family AT3G22190 56.359 3.41e-122 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00697 - - gmx:100781346 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00697 5 6039365 6045298 Spst5g00697 5 6039365 6045298 ECH