Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00685 ATGGAAGGGTACAAGTTACAACTTCCTTTTCACCTCCTCCATCACACATATGTTAAATTGTTGTTTACTTGTCCAGATTGGTTTGAGAACTTTAAGAGAGAGAATAGAATACGAGAACAAAAGCGTAACATGGCGACGTACTTCCATGGAAACACTTCGGAGATTCAATCTTCTGCAGATGGCTTGCAAACGCTTTACCTTATGAATCCATCTTACGTACCTTATGCTGACGCGCCGCACCACCCAACGCTTCTCGTCAATCCCAACGCTTCCAACGCGCTCAACCTCGCGAGTCTCTCCCACGCGCCGCCAGTGTCACCGTCCCCCAACCACCACCAGCACGTGATTCACGGCTTCACAAACATCCTCGGATCCGGGAATTCAGACGAACACACTCACGCCAGACAGTCTTTGTTCGGGGAAAATATCGCCTCCTTCCACGGCTTCTCCGGCGGCCCGTCCTCCGTCGCCCCTCGCGTTCACTATAACCTCTGGGGTTCTGGGGTTGATCAACCGGGAACGCCTTCTAGCAGCTCAGGCGGTGCCGGTTTCCGACGGCCGAGTCAACAGGGGTTGTCTCTCAGCCTTTCGTCTCAGCAAACAAATTTCAGGTCAGTCTCCAATGAGCTTGAAGTTGCCGGACAGGGCCACGTCACTGGAACTGGGAACTCGCCGACGTCAGCGGCGTCGACAGGAGTTTCCGGTGTGATTTTGGGGTCGAAGTATCTGAAAGCCGCGCAGGAGCTTCTAGATGAAGTTGTTAACGTAGGAAAAGGAATCTACAAAGAGGAAAAATTCTCAGAGAAGGTGAAAGCGAATAGGGAATCGACTAATTCTGGTGCTGGTGACGGTTCAAGTGGTGGAGGAGAAAACAGTGCAGGGAAACAAGTGGTTGAACTCAGCACCACTCAGAGACAAGAACTTCAGATGAAGAAGTCCAAGCTTGTCAGCATGCTCGATGAGGTAATGATTTTGTTACTATTATCTTTTGGAGAGGAGGCAATAATCAAGAATGTGACAGTGGCAGAGCGTCAGTGA 1038 0.5048 MEGYKLQLPFHLLHHTYVKLLFTCPDWFENFKRENRIREQKRNMATYFHGNTSEIQSSADGLQTLYLMNPSYVPYADAPHHPTLLVNPNASNALNLASLSHAPPVSPSPNHHQHVIHGFTNILGSGNSDEHTHARQSLFGENIASFHGFSGGPSSVAPRVHYNLWGSGVDQPGTPSSSSGGAGFRRPSQQGLSLSLSSQQTNFRSVSNELEVAGQGHVTGTGNSPTSAASTGVSGVILGSKYLKAAQELLDEVVNVGKGIYKEEKFSEKVKANRESTNSGAGDGSSGGGENSAGKQVVELSTTQRQELQMKKSKLVSMLDEVMILLLLSFGEEAIIKNVTVAERQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00685 345 MobiDBLite consensus disorder prediction 167 200 - -
Spst5g00685 345 Pfam Associated with HOX 236 322 IPR006563 -
Spst5g00685 345 SMART prehox3 231 337 IPR006563 -
Spst5g00685 345 MobiDBLite consensus disorder prediction 269 295 - -
Spst5g00685 345 MobiDBLite consensus disorder prediction 169 200 - -
Spst5g00685 345 MobiDBLite consensus disorder prediction 273 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00685 Spst-Chr5 5922388 5923939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00685 44 336 Homeobox Transcription Factor Family AT2G35940 37.160 8.52e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00685 - - vum:124842043 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00685 5 5922388 5923939 Spst5g00685 5 5922388 5923939 ECH