Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00674 ATGGAGTCGCGGATGGATCACTACGAGATCATGGAGCAGATCGGTCGCGGAGCGTTTGGCGCCGCGATTCTGGTGAACAATAAAGCGGAGAAGAAGAAGTGCGCGCCGTTTTTCGTCTTGATTTTGCGTTTGACTGAGTACGTGTTGAAGAAAATAAGGCTCGCGCGGCAGACTGAACGATGCCGAAGATCTGCTCATCAGGAGATGGCGCTTATTGCTCGAATTCAGCACCCTTACATTGTTGAATTCAAAGAGGCCTGGGTTGAGAAGGGTTGCTATGTTTGCATTGTTACTGGATATTGTGAAGGTGGAGACATGGCTGCATTGATGAAAAAGTCAAATGGGGTTTACTTTCCTGAGGAGTTGGATGTTTTTGGCATTGCTAAGAAACTCTGCAAGTGGTTTACTCAACTACTCTTGGCAGTGGAATACCTGCATTCAAATTTTGTTTTACATCGCGACCTAAAGTGTTCCAATATTTTTCTTACCAAGGATCAAGATGTTCGCCTTGGGATAGACTATGATGTTTTCATCCTGAAATTTGTCTGCAATCCTGACAATCATATAGGGGATTTTGGGCTTGCTAAGACACTAAAAGCGGATGATTTGGCTTCTTCGGTGGTAGGAACTCCCAACTATATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATTCAAATCTGACATTTGGTCACTAGGGTGTTGTATATATGAGATGGCTGCTCATCGCCCAGCTTTTAAAGCTTTTGATATGGCAGGGTTGATAAGCAAGATAAACCGTTCTTCTATTGGCCCTCTGCCTCCCTGTTATTCTCCATCGTTGAAAACACTGATAAAGGGCATGCTGAGGAAAAATCCTGAGCATCGTCCAACGGCATCTGAAGTCTTAAAGCACCCTTATTTGTTACCTTATGTTGATCAATATCGTTCATCTTTCTGTTCTCCAACAGCCAGTTCTCCTGAAAAGCCAATTTCTGCTGTTCATTATCCTCGAAAAAATAAGCCAGAAGGTCAAAACAGTAGTTGTTCAAGTACCGATAAAGATAGTTTGATGTCAAATGTGAAAAACACTGAAAATGCAGTCCAGAAGTGTGGTAACAAAAGTACTGAAATAGACATGACATCAATTGAGGATGATGGCTCTGAGCAACTCCAGCCTGATGAAGAAGGAAATGGCTCCATCAAAGTCAACGCCAAAACTGTTGATCAAGAGGTGACAAAGCAATCTAATAATGAACACCATTCTAATGTTGTATCTAAGCAACCAAAAGCAATTAAGAATGTAGTGACAACATTAAAAAACGGAAAACTTAGAGAGACAAGTTCACCCATAAGAGGCAATCGCATAAAGGGTGGTGGTGTGTTGACACATAAAATAAATACAGAGACATTGTCCAAATTGCCCAAACTCAATTTTGGTGCTTGTGATTTGAATCCGAATTTGGAGGTGCCAACTATTGCACCTTCAAAAGCGACTCCTGATTCTGCTAAAAGAATGCAAGGATCACATACATCAAAGCATCAGTTACCGATGATTGAATCGACACCAAAAACTAAACCTCGACATAATGTGATTCCACCACTGGGTCCTGTCAAACAGGTAGAAGGACGTGAAGTTCCTGCTAAGCCAAGGCAAACTCCTCCAAGCTTACTTAAACCACCTTCTTTTCCAGGACATGTGAGGCAGGCTGGGTTTGATGTTCCAAATGCAGCAAATAATACTGGAATGTCAAGTCCAAACAAAATGGTTCGGGAGCCTAAGATGAGCCATCACCAGTTGACCAAGAGTCAGCTACCACATGTTTCTAGAGAGATTACTCGAGAGCCTTTAAAGACTTTTGAAAGCAGTTCCAAAGAAATGCAAACAGACAGTAGCAATTCTGTCTCATCTTCTTTTTCTATTCAAGGATTTGAACTTTCTGATTTTGCAACCACTTTTATTGACTTAGGCGACACAACACTTCCTGATCAAGAGAGTTTAAACCACGCTGAAAATGTGGAATCACGAGCAGATAGCAGTTCACCTGCATCTTATTCGCATTTTGAGATGTCTGAACAATTGTCCGAGGAAACCTCTGTCATTACACCACATTTTCAGAAGATAATGACTAGTGCTGAGAAAGTATGTCCCAGTTTATCTCTAGATCATTCAGTTCATGATACTGAGGTAATGTTTGCTTCTGATGATAGTTTTCCCACAAATCAGAGGACTACATTTGGTGTCTCCAGGTGTGAAAATACATCTGTTGATAGCTCTGCTGAAATCACAGAAAATATCAAAGATGTTGAAGATATTTCTATGGAGATGTCTTCATCCAAGTCTCTCCAACAGCCACTCCCCGTTTCTGGAGAAAAGTCTGTTTGTCAAGAATTTGGTCCAGCAAGCAAGCCAAATAATAGGCTTGATAAAGTCAGCCATCCAAAACTTATGTGCATCTCCAGTGGTGATGACAAATTTATGGTGAGGGAAAGAGTGTCATCAGCGGAAGAAACTGCTCCTTTGATTATCTCTACCAAAATTTCAAGCCAGAAAGTTTTGCAAGAGGAGAAAGGAACAATTTCAGCACCAGAAAGGCCAGCTGTTGGCCATCTTCCTCCAGCTTTTGATGATGTCATTCATGTCATACGCCATAGCAGTTACCGTGTGGGGAGTGAGCAGCCAGTGAAGGAATCCGTGGAAATGGGTGTTCAAAATGTAGATGTCGGTAAGTTTATCAACATTGTAAGGGATGATATAGAAATGAGAAATGTGAGCACTCCTTTGACCCTAAAACCTTCTAATTGTTCTGAAGCTATTGGCTTGAAGACAAATATTTCTGAAAATATGGAAATCAGAAACTTGAATAGTCCTCCTAACTTAAAATCTTCAAGTTGCACTGACTCGTTAAGCATGAAATCAAGTTATACTGATCATCCTGGTGTTAAGGAACAAGATGTGAAAAATCCTGATTCTATTGTTTCAAAATCTAATTCCCTTGAGTATTCCAGATTCACTCCTACAGCTGAAGAGGAACCACCAGCAAAGGAAATTTTGGATGTTAAATCTTCCAGGCAGAGAGCTGAAGCACTTGAAGGACTGTTAGAATTATCTGCAGATTTGCTGCAGCAAAATAGATTGGAAGAACTTGCAGTTGTTCTGAAGCCCTTTGGAAAAGATAAGGTCTCCCCAAGGGAGACAGCCATTTGGTTAGCTAAGAGTTTAAAAGGACTGATGATCGACGAAAGTGGAGGACGCAGTTAA 3243 0.4117 MESRMDHYEIMEQIGRGAFGAAILVNNKAEKKKCAPFFVLILRLTEYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAALMKKSNGVYFPEELDVFGIAKKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGIDYDVFILKFVCNPDNHIGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLLPYVDQYRSSFCSPTASSPEKPISAVHYPRKNKPEGQNSSCSSTDKDSLMSNVKNTENAVQKCGNKSTEIDMTSIEDDGSEQLQPDEEGNGSIKVNAKTVDQEVTKQSNNEHHSNVVSKQPKAIKNVVTTLKNGKLRETSSPIRGNRIKGGGVLTHKINTETLSKLPKLNFGACDLNPNLEVPTIAPSKATPDSAKRMQGSHTSKHQLPMIESTPKTKPRHNVIPPLGPVKQVEGREVPAKPRQTPPSLLKPPSFPGHVRQAGFDVPNAANNTGMSSPNKMVREPKMSHHQLTKSQLPHVSREITREPLKTFESSSKEMQTDSSNSVSSSFSIQGFELSDFATTFIDLGDTTLPDQESLNHAENVESRADSSSPASYSHFEMSEQLSEETSVITPHFQKIMTSAEKVCPSLSLDHSVHDTEVMFASDDSFPTNQRTTFGVSRCENTSVDSSAEITENIKDVEDISMEMSSSKSLQQPLPVSGEKSVCQEFGPASKPNNRLDKVSHPKLMCISSGDDKFMVRERVSSAEETAPLIISTKISSQKVLQEEKGTISAPERPAVGHLPPAFDDVIHVIRHSSYRVGSEQPVKESVEMGVQNVDVGKFINIVRDDIEMRNVSTPLTLKPSNCSEAIGLKTNISENMEIRNLNSPPNLKSSSCTDSLSMKSSYTDHPGVKEQDVKNPDSIVSKSNSLEYSRFTPTAEEEPPAKEILDVKSSRQRAEALEGLLELSADLLQQNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGLMIDESGGRS 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00674 1080 SMART serkin_6 8 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00674 1080 MobiDBLite consensus disorder prediction 486 509 - -
Spst5g00674 1080 Gene3D Transferase(Phosphotransferase) domain 1 103 380 - -
Spst5g00674 1080 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Spst5g00674 1080 Pfam Protein kinase domain 8 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00674 1080 SUPERFAMILY Protein kinase-like (PK-like) 4 347 IPR011009 -
Spst5g00674 1080 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
Spst5g00674 1080 ProSiteProfiles Protein kinase domain profile. 8 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00674 1080 CDD STKc_Nek 7 302 - -
Spst5g00674 1080 MobiDBLite consensus disorder prediction 335 372 - -
Spst5g00674 1080 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 1029 - -
Spst5g00674 1080 MobiDBLite consensus disorder prediction 946 971 - -
Spst5g00674 1080 MobiDBLite consensus disorder prediction 946 986 - -
Spst5g00674 1080 MobiDBLite consensus disorder prediction 317 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00674 Spst-Chr5 5785849 5793958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00674 14 302 MAP Kinase Kinase Kinase AT1G53570 29.452 5.81e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Spst5g00674 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00674 K08857 - gmx:100818943 1684.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00674 5 5785849 5793958 Spst5g00674 5 5785849 5793958 ECH
Spst5g00674 5 5785849 5793958 Spst11g01157 11 35920208 35926242 PCT