Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00671 ATGTCTTCCAACAAGAGAAGGTTTATGAGAACCCTATTCAAAGCAAATGGAGGATGTGGATGTAGCAAACCTAAGCCCTCTGACGTACACCAACCCTCCCCAAAACACGCAATCCCAATTGACCAAAACACAAGCCCTAGCAGCATCAATTCATCCACTACTTCCGACGACGACCAACTCTTCACTCCCACCACCATCTCCCAACGCGACACAAACCATCAAAACGCCAACAAGAGCATGCCAAACCCAAACCCAAAGCTCGTTGACAGTGTGGCCGTTGAGAAGGAATCAAACGATCCGTACAAGGATTTTCGACACTCCATGCTCCAAATGATCTTCGAGAGAGAGATCTACACGAAATCGGATCTTCAACAACTTCTCGAATGCTTCCTCCGTCTTAACGCCGCCTGCCACCACCAAGTCATCGTTCAAGCCTTCGTCGAGATCTGCGAAGAAGCATTCCCGAAGAAGAATATCAACGGCGGCGGCGGCGGCGGTGGTGCGTGCTCCTAA 513 0.501 MSSNKRRFMRTLFKANGGCGCSKPKPSDVHQPSPKHAIPIDQNTSPSSINSSTTSDDDQLFTPTTISQRDTNHQNANKSMPNPNPKLVDSVAVEKESNDPYKDFRHSMLQMIFEREIYTKSDLQQLLECFLRLNAACHHQVIVQAFVEICEEAFPKKNINGGGGGGGACS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00671 170 ProSiteProfiles OVATE domain profile. 93 152 IPR006458 -
Spst5g00671 170 MobiDBLite consensus disorder prediction 37 84 - -
Spst5g00671 170 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 37 154 IPR038933 GO:0045892
Spst5g00671 170 NCBIfam uncharacterized plant-specific domain TIGR01568 91 150 IPR006458 -
Spst5g00671 170 MobiDBLite consensus disorder prediction 15 87 - -
Spst5g00671 170 Pfam Transcriptional repressor, ovate 97 152 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00671 Spst-Chr5 5765661 5766173 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst5g00671 Ovate 2.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00671 - - gmx:102670259 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00671 5 5765661 5766173 Spst5g00671 5 5765661 5766173 ECH
Spst5g00671 5 5765661 5766173 Spst11g01165 11 35994617 35995180 PCT