Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00648 ATGTCCAGTTTCAGATCAGCGATGGCAACTTCTTCTTTCTTCTTCCCTTTGTTATTGCTGTTTCTCACTGTTTCAGATTTATTTGTGCAAACCCGTGGACTTAATTTCGGAATCAACTACGGACAAATAGCCAACAATCTTCCATCTCCCTCTCGTGTGGCTGTTCTAATAAAATCTCTTAATGTCTCAAGAATCAAACTCTATGATGCTGATCCAAATGTTCTATCTGCATTCTCCAACTCAGATGTGGAATTCATCATAGGATTAGGGAGCGAGAATCTGCAGAACATGAGAGACCCTTCTAAGGCTCAGAGTTGGATCCAACAACATGTTCAACCTTATATTTCACAAACCAAAATTACTTGTATAACTGTAGGAAACGAGGTCTTCAGCTACAATGATACTCAGCTCTCAGCAAATCTCCTCCCTGCAATGCAAAGTGTGTATAATGCCCTTGTTACTCTAGGACTAGCACAGCAAGTTACTGTTACAACAGCTCATTCTTTCAGCATTTTAGCCACCTCATTCCCTCCTTCATCAGGGGCATTCAGGCAAGATCTGATACCATATATTCAACCCCTTCTTAACTTCCATGCTCAAATCAAATCACCCTTCCTCATTAATGCATATCCCTTTTTTGCATACAAGGACAACCCAAACCAAATTTCCTTAAATTATGTACTATTTCAGCCAAATTCAGGGTCCACGGATCCAATGACCAATTTGCATTATGATAATATGTTGTTTGCTCAAATTGATGCTGTCTATGCTGCCATCAAAGCTCTGGGGCATACTGATGTTGAAGTCAGAATTTCAGAAACTGGTTGGCCTTCTAAAGGTGACCCTGATGAAGTTGGAGCCACACCACAGAATGCAGAAATATACAATAGTAATTTGTTGAAGAGGATAGAGCAGAAGCAAGGCACTCCTGCAAAACCATCGGTCCCAATTAATATTTATTTCTTTGCACTTTTCAATGAGAATATGAAGACTGGTCCTATATCAGAGAGAAACTATGGCCTTTATTATCCTGATGGCAACCCAGTTTATAACATTGGATTAGAAGGTTATCTCCCAGAAATGGTTATAGAGTCAAGATCTAACGTAAGTATACACACTTGA 1122 0.3957 MSSFRSAMATSSFFFPLLLLFLTVSDLFVQTRGLNFGINYGQIANNLPSPSRVAVLIKSLNVSRIKLYDADPNVLSAFSNSDVEFIIGLGSENLQNMRDPSKAQSWIQQHVQPYISQTKITCITVGNEVFSYNDTQLSANLLPAMQSVYNALVTLGLAQQVTVTTAHSFSILATSFPPSSGAFRQDLIPYIQPLLNFHAQIKSPFLINAYPFFAYKDNPNQISLNYVLFQPNSGSTDPMTNLHYDNMLFAQIDAVYAAIKALGHTDVEVRISETGWPSKGDPDEVGATPQNAEIYNSNLLKRIEQKQGTPAKPSVPINIYFFALFNENMKTGPISERNYGLYYPDGNPVYNIGLEGYLPEMVIESRSNVSIHT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00648 373 SUPERFAMILY (Trans)glycosidases 36 352 IPR017853 -
Spst5g00648 373 Gene3D Glycosidases 35 357 - -
Spst5g00648 373 Pfam Glycosyl hydrolases family 17 37 352 IPR000490 GO:0004553|GO:0005975
Spst5g00648 373 FunFam Glucan endo-1,3-beta-glucosidase 14 34 358 - -
Spst5g00648 373 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 354 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00648 Spst-Chr5 5563887 5565474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00648 86 367 Glycoside Hydrolase AT2G27500 68.198 1.04e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00648 - - gmx:100786020 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00648 5 5563887 5565474 Spst5g00648 5 5563887 5565474 ECH
Spst5g00648 5 5563887 5565474 Spst11g01192 11 36242710 36251694 PCT