Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst5g00645 | ATGACAAATGTACCTATTCTTACACAAGAATCAGCTACATTAACCATGGTACAAGTCAAGGGCAAGGGAAGTGGTCCTATGCAGTCCCGCCTACTTAGGATTCCAGAGGATGGGGCCAGAGGTGGAATGTACCATCATCATCAACACCAAGGAAAAAGCATTCATTCTTCTTCCAGAATGCCAATTCCTTCTGAGAGGCACATGTTCCTTCAAACGGGAAATGGGTCTGGTGATTCTGGACTTGTGCTCTCAACTGATGCCAAGCCAAGATTAAAATGGACACCAGATCTTCATGCCAGGTTTATAGAAGCAGTCAATCAGTTAGGGGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGGCTTACTTTATATCATCTAAAGAGCCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCATGGACAAAGCAACAACGTGACGCACAAAATCACAACAAGTGCAACAACTGGGGAAAGACTTTCTGAAACCAACGGAACTCACATGAACAAATTAAGCCTTGGACCGCAGGCTAACAAAGATTTGCATATAAGCGAGGCACTGCAGATGCAGATTGAGGTGCAGAGAAGGCTCAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTAGGATAGAGGCCCAAGGAAAATACCTTCAGTCTGTGTTGGAGAAAGCTCAAGAGACTCTTGGCAGACAAAATTTGGGAATAGTAGGACTTGAAACTGCCAAAGTTCAACTATCAGAGCTGGTGTCCAAAGTATCATCTCAGTGCCTTAACTCAGCATTCTCAGAGATGAAGGAACTGCAAGGATTTTGCCCTCAGCAAACACACACCAACCAGCCAAACGATTGCTCAATGGATAGTTGCCTAACATCATGTGACAGATCACAAAAGGAGCAAGAGATTCAAAATGGCTGCTTAAGACACTTCAACAGCCATGTGTTCATGGATCGAAAGGAAGCCACAGAAGCTCCCAGCAACCTTAGGAACTCCGAACTCAAGTGGTGTGATGATGGGAAAAAGAACACCTTCCTTGCCCCATTGAACAAGAATGAAGAAAGAAGAAACTATGCAGCTGAAAACAGTCCTGGCAACTTATCCATGTCCATTGGACTTGAAAGAGAAACAGAAAATGGAAGCAGCGTGTATCCTGAAAGACTAATCACAGAAAGCCAATCAGAAGGTGATTTCCAGCACCGGAACAGAATCAAGACAGAAACAATGAAACCAGTGGATGAAAAGGTTTCTCAAGATTATAGGATGCCAGCTTCTTACTTTGTAGCAGCAAGATTGGACCTAAACAGCCATGGAGACAATGAAGCTGCAACCACTTGTAAACAACTGGACTTGAATAGATTCAGTTGGAGCTGA | 1392 | 0.4361 | MTNVPILTQESATLTMVQVKGKGSGPMQSRLLRIPEDGARGGMYHHHQHQGKSIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKITTSATTGERLSETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLETAKVQLSELVSKVSSQCLNSAFSEMKELQGFCPQQTHTNQPNDCSMDSCLTSCDRSQKEQEIQNGCLRHFNSHVFMDRKEATEAPSNLRNSELKWCDDGKKNTFLAPLNKNEERRNYAAENSPGNLSMSIGLERETENGSSVYPERLITESQSEGDFQHRNRIKTETMKPVDEKVSQDYRMPASYFVAARLDLNSHGDNEAATTCKQLDLNRFSWS | 463 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst5g00645 | 463 | SUPERFAMILY | Homeodomain-like | 87 | 143 | IPR009057 | - | |
Spst5g00645 | 463 | MobiDBLite | consensus disorder prediction | 162 | 181 | - | - | |
Spst5g00645 | 463 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 88 | 143 | IPR006447 | GO:0003677 | |
Spst5g00645 | 463 | Pfam | MYB-CC type transfactor, LHEQLE motif | 189 | 235 | IPR025756 | - | |
Spst5g00645 | 463 | Pfam | Myb-like DNA-binding domain | 90 | 141 | IPR001005 | - | |
Spst5g00645 | 463 | Gene3D | - | 87 | 145 | - | - | |
Spst5g00645 | 463 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 85 | 145 | IPR017930 | - | |
Spst5g00645 | 463 | Coils | Coil | 191 | 211 | - | - | |
Spst5g00645 | 463 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 49 | 341 | IPR044848 | GO:0003700 | |
Spst5g00645 | 463 | MobiDBLite | consensus disorder prediction | 162 | 180 | - | - | |
Spst5g00645 | 463 | FunFam | Myb family transcription factor | 87 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst5g00645 | Spst-Chr5 | 5549804 | 5553756 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst5g00645 | 120 | 463 | G2-like Transcription Factor Family | AT3G04030 | 49.280 | 6.71e-97 | 293 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Spst5g00645 | Myb_DNA-binding | 4.2e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst5g00645 | - | - | gmx:100810396 | 789.26 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst5g00645 | 5 | 5549804 | 5553756 | Spst11g01194 | 11 | 36256280 | 36259209 | PCT |