Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00642 ATGAATTTCCAACAATCAGAGCAAGAGGTGCTACTGGAAGAAACAGAAGCCACATTTTCTCAACTGAGCCAACAATCATTACTCTCACTCACCATTGATGAGTTCTATGGCAAGAACGGAAGGAGCTTAGGGTCCATGAGCATGGATGAGTTCATAGCCAGCATTTGGAACACAGATGGCATCCAAGTTAACCCACCACCAGTAGCCACCTATGATGAAGCTGCAAGGAACAAAAGCGTTGCACCAGAACCCATCATTCTCCCGCCAGCTCCATTCTCTGTCCCTTCCCCAATTTGCAAGAAAACTGTGGATGAAGTTTGGTCTGAGATCCACAAAAGCCAACCAATATACAATGAAGGTAATAGCCTTGGCAGGAATGAAACACTCCAAAAGCAACCCACACTTGGAGAGATGACTTTGGAGGAATTCCTAGTGAAAGCTGGGGTTGTCCGAGAATCATCATCACTATTCAATACTTTACCACCACCTCAGAACCCTTTTGGTAATATTGCAACTAATGTACCATTGGGTGCAAGTTATATACTAATAGGGACTACCGGATCTAGTGTGTCTGGCGGTGGATTTCAACCACATCAAATGTTGCCACAGAATAACACCTTAGTTGTAAAAGATCTCACTACAACTGGTGGTGGTGTTGTTGCTGCTGTTGGTGGTGGTGCTGTTGCTGCTGTTGGTGGTGCTGGAGCTGGTGCTGGTGGTATTTCTGCTCTTGGTGGTGCTGGTGTTAGTGGCGCAGGTGCTATTGCTGCTCTTGGTGGTGCTGGTGTTAGTGGCGCTGGTGGTATTGCTGCTCTTGGTGGTGCTGGTGTTAGTGGCGCTGGTGGTATTGCTGCTCTTGGTGGTGCTGGTGCTGCGGATAATTCTCAAAACTCAGGAGAATCCAGTGGGAAGGGTAAGAAAAGGATAATTGATGGTCCTCCGGAAGTGGTAATAGAGAGAAGGCAACGCAGAATGCTGAAGAATCGAGAATCAGCAGCACGTTCTCGAGCAAGAAGACAGGCATATACTGTAGAGCTTGAAGCAGAGCTGAGTGTGCTGAAAGATGAGAACGAAAAGCTAAAAAAAGTTCTGGCTGAAGATGAACGCAAGAGAAAGGAAGAGATATCTCAGAGGAAGCCCACAACAATGGCTCAAAAGAGGACAGAGAAAAAGAGGGCATTGAAGAGGCCTCTGAGCGCATCCTGCTCTTGGCTGAGTTTTCAAGCTCCAACAAGGTGCTCTAGAATTACAAGTTGGTTGTGGAAGGTTACTGCTGACACTGACATTCATCATCCGAAAGCAGCCTAA 1308 0.4679 MNFQQSEQEVLLEETEATFSQLSQQSLLSLTIDEFYGKNGRSLGSMSMDEFIASIWNTDGIQVNPPPVATYDEAARNKSVAPEPIILPPAPFSVPSPICKKTVDEVWSEIHKSQPIYNEGNSLGRNETLQKQPTLGEMTLEEFLVKAGVVRESSSLFNTLPPPQNPFGNIATNVPLGASYILIGTTGSSVSGGGFQPHQMLPQNNTLVVKDLTTTGGGVVAAVGGGAVAAVGGAGAGAGGISALGGAGVSGAGAIAALGGAGVSGAGGIAALGGAGVSGAGGIAALGGAGAADNSQNSGESSGKGKKRIIDGPPEVVIERRQRRMLKNRESAARSRARRQAYTVELEAELSVLKDENEKLKKVLAEDERKRKEEISQRKPTTMAQKRTEKKRALKRPLSASCSWLSFQAPTRCSRITSWLWKVTADTDIHHPKAA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00642 435 Gene3D - 318 372 - -
Spst5g00642 435 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 385 IPR043452 GO:0003700|GO:0045893
Spst5g00642 435 Pfam bZIP transcription factor 320 366 IPR004827 GO:0003700|GO:0006355
Spst5g00642 435 MobiDBLite consensus disorder prediction 289 311 - -
Spst5g00642 435 MobiDBLite consensus disorder prediction 371 388 - -
Spst5g00642 435 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 318 370 IPR004827 GO:0003700|GO:0006355
Spst5g00642 435 SMART brlzneu 316 396 IPR004827 GO:0003700|GO:0006355
Spst5g00642 435 Coils Coil 343 377 - -
Spst5g00642 435 SUPERFAMILY Leucine zipper domain 320 366 IPR046347 GO:0003700|GO:0006355
Spst5g00642 435 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 323 338 IPR004827 GO:0003700|GO:0006355
Spst5g00642 435 MobiDBLite consensus disorder prediction 371 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00642 Spst-Chr5 5518982 5527862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00642 24 399 bZIP Transcription Factor Family AT1G49720 31.795 2.52e-35 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst5g00642 bZIP_1 2.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00642 K14432 - gmx:100799576 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00642 5 5518982 5527862 Spst5g00642 5 5518982 5527862 ECH