Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00627 ATGGCTAAGATGACGTACCATCCATGTTTCCTTCCTGATACAACAAGTATCATTGAGCAGATACTTCAACCTTCATTTACTAGAAAGATCATGGCAAGAATTCAGGAGGGATGTGCAGTGAAAATTGACTTTGGCACATCTTGCCCAGGGCAGGAGAAACACCTTTGTGCAGAGGAATTATCATCTACGGTCGTCACAAAGATGCGGGAGATTGCAGAGGCATATCGAAAACAGCAAAGAATGCAGCAGTCAGCTTATTTCAATGATTCTCAGCATAAAGCCACAGTAGATGAAGCTCAAAGCTTTGCTAACAAGAAAAAGGAGGATTTCAGTTCTGCAATAAGTAGGGCCACGCATTTGCTTGATGGTAATAACCAGAAAGATGATATAGTTGTGTTTCAGGATTATCTAGAAGAGCTTGTGAGCATTATGAATGGCATCAAGGCCATGGACGAAATTGGTTAG 465 0.4151 MAKMTYHPCFLPDTTSIIEQILQPSFTRKIMARIQEGCAVKIDFGTSCPGQEKHLCAEELSSTVVTKMREIAEAYRKQQRMQQSAYFNDSQHKATVDEAQSFANKKKEDFSSAISRATHLLDGNNQKDDIVVFQDYLEELVSIMNGIKAMDEIG 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00627 154 Gene3D - 19 117 - -
Spst5g00627 154 Pfam Hsp70 protein 48 100 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00627 Spst-Chr5 5356501 5360057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00627 33 97 Calmodulin-binding Proteins AT5G02500 49.275 3.61e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00627 K03283 - vra:106774805 79.3369