Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00622 ATGAAATTTGAGCCGGATCGGTCTCTCGTTCATCCCGCCTATGGCGTCCTTAATGTGGTTGGAACTGGCCTTAGGAGGATTAGTTACTGGTCCAACTATTCGGGTTTGTCAATCGTATCTCCTGAGATATTGTATGCAAAACCACCTAATAGATCAAGTGCGAACCAGAAGCTTTACAGTGTGATATGGCCTGGAGAAACAGTATCTAAACCCCGTGGATGGGTCTTCCCAAATAATGGTAGACAGTTGAGAATTGGTGTGCCTATCCGAGTCAGATACTGTGAATTTGTCTCACCAGTGCAGGAAACTGAGACGTTTAAAGTTTTTTTTTGTGTTGATGTATTCACAGCAACTCTGAACTTGTTGCCTTATGCTGTTCCTTACCATTTTTGTCCCATTTGGAGACGGACACAAAAAAAAAAAAAAAATCCAAGCTACATAGAACTTGTCAACCTAATCAAAACTGGTTACTTTGATGGTGCCATCAGTGACATTGCTATTGTCACAAATTGGACAAGGATTGTAGATTTTACGCAACCATATGCAGCATCGGGACTTGTTGTGGTGGCCCCGTTCACAAAAATTAATCCAGGTGGTGGGAACTAG 606 0.4224 MKFEPDRSLVHPAYGVLNVVGTGLRRISYWSNYSGLSIVSPEILYAKPPNRSSANQKLYSVIWPGETVSKPRGWVFPNNGRQLRIGVPIRVRYCEFVSPVQETETFKVFFCVDVFTATLNLLPYAVPYHFCPIWRRTQKKKKNPSYIELVNLIKTGYFDGAISDIAIVTNWTRIVDFTQPYAASGLVVVAPFTKINPGGGN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00622 201 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 193 IPR015683 -
Spst5g00622 201 Gene3D - 83 196 - -
Spst5g00622 201 Gene3D - 3 82 - -
Spst5g00622 201 FunFam Glutamate receptor 78 198 - -
Spst5g00622 201 SUPERFAMILY Periplasmic binding protein-like II 59 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00622 Spst-Chr5 5335050 5335655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00622 1 199 Ion Channels AT1G42540 60.804 2.12e-78 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00622 K05387 - gmx:100777478 328.176