Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00609 ATGCCGAAAATGGGACTCAAAAGCTTATTCTTATTTAAAACAACACAATCGCCACCTTCTAAAAAGACCTTCTCCCACGCGTTAACAGAGGAAAACATCGAAGCCGCTCGTTCCATAATTTCCACATGGGACCTTCTTTCTCCTTCCCACCAAACTCCTTCTCTCTGCCAACAAACCGTTCCTCTTTTCTCCAACACGCGTCAGGAAGCCAAACAGTACCTTAACGCCGTTATGAGTCTGCAGACCACTATGCACCACCTCGTCGAATACGATTCCAACTCGGAGAGCCTCGTTCAAGCCCAATTCCTAATGCAAATGGCCATGAAGAGGCTCCAAGCCGAGTTGTACCGGATTTTAGCCGAAAACAGGGACAATCTCGATCCTCAATCTGTCATCTCAACCGATTGTCGTGCCAGCAGCGTCTCCGACGATGAAGATTACGATTACTCCGAGAACGATTTCCGATTCGCCGGCCCCGGAAGCTCCATCTCCACTGTCGCCATGGTGGATTTGAAAGCCATTGCGGAGTGTATGGTTTCCGCGGGATACAGCAAAGAATGCCTAAAGATTTACGTCCAGATGAGAAAAGAAATCGTGGATGATGCGATGTGTCATATGGGAGTGGAGAGGCTGAGTTTCTCTCATGTTCAGAGGATGGACTCGGAGATTCTGGAATCGAATATTAAGTGTTGGCTGAACGCCTTTAAGATCGCCGTCCGAACTCTGTTTCAAGGAGAGAAAAAACTCTGCGACTGCGTCTTCGGTTCGCCGGAGAGGAGGATCGCGGAGTCGTGTTTTGCCGCGATTTGCAGAGATGCTATGACGGCGCTGTTCGGATTCCCCGAGAACGTGGCGAAGTGCAAGAAAACGCCGGAGAAAATGTTCATGACGCTGGACATGTACGTAGCGATCACTGAAAACCGGCAACAAATGGAGTCCATCTTATCGTCAGAATCAACCTCCTCCTTCAGATCGCAGGTGTGGGCTTCTAAGGCGAAGCTCGGCGAGGCCGTTCGGACGATGTTAACCAACTTCGAATCTGCGATTCAGAAGGAATATTCGAAGATTCCCGTGCCTGGAGGAGGAATCCACCCGCTCACGCGCTACGTCATGAACTACATCGCGTTCCTCGGCGATTACAGGGATGCGCTCGCTGAAATAGTCGCAGATTGGCGTCAGAATCCGTTGCCGGATTCTTACTACCGCAGTTCGAATCGCGAGGGAACCAAATGCTCGCCGGAGGTAGCTGAACGGATCGCATGGCTAATATTAGTGCTCCTCTGCAAACTCGACAGTAAAGCGGAACTATACAAGGACGTTGCACTCTCTTACCTGTTTCTCGCAAACAACATGCAATACGTCGTCGTAAAAGTGCGAACCTCGAACCTAGGGTTCATCCTCGGGGAGAATTGGTTAACAAAACACGAAGCGAAGGTGAAAGAGTACGCTTCCAAGTACGAGCGCATTGGATGGGGCAAGGTTTTTGCGTTGCTACCTGAAAACCCGACGGCGGAGCAAGCGAGGGAGATTTTCGAGAGCTTCAACGTCGCCTTCCATGAAACATGCAAGGCACAGTCCTCCTGGTTCGTACCCGACACCAATCTTCGAGACCAAATGAAAGCCTCGCTTACTGCTAAGTTAGTGCCAATCTGCAGAGACTACATCCACAAGTATCAGAACGAATCGGATGCGATTTCCGGGTTTTCGCCCGATGATTTGGCCAATGATCTCTCAGATATTTTATCCGGTGGCGTTTCGTTGTCGCAAACTTCTTGA 1776 0.5 MPKMGLKSLFLFKTTQSPPSKKTFSHALTEENIEAARSIISTWDLLSPSHQTPSLCQQTVPLFSNTRQEAKQYLNAVMSLQTTMHHLVEYDSNSESLVQAQFLMQMAMKRLQAELYRILAENRDNLDPQSVISTDCRASSVSDDEDYDYSENDFRFAGPGSSISTVAMVDLKAIAECMVSAGYSKECLKIYVQMRKEIVDDAMCHMGVERLSFSHVQRMDSEILESNIKCWLNAFKIAVRTLFQGEKKLCDCVFGSPERRIAESCFAAICRDAMTALFGFPENVAKCKKTPEKMFMTLDMYVAITENRQQMESILSSESTSSFRSQVWASKAKLGEAVRTMLTNFESAIQKEYSKIPVPGGGIHPLTRYVMNYIAFLGDYRDALAEIVADWRQNPLPDSYYRSSNREGTKCSPEVAERIAWLILVLLCKLDSKAELYKDVALSYLFLANNMQYVVVKVRTSNLGFILGENWLTKHEAKVKEYASKYERIGWGKVFALLPENPTAEQAREIFESFNVAFHETCKAQSSWFVPDTNLRDQMKASLTAKLVPICRDYIHKYQNESDAISGFSPDDLANDLSDILSGGVSLSQTS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00609 591 Gene3D Exocyst complex component Exo70 55 587 - -
Spst5g00609 591 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 577 IPR004140 GO:0000145|GO:0006887
Spst5g00609 591 Pfam Exo70 exocyst complex subunit 230 578 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst5g00609 591 SUPERFAMILY Cullin repeat-like 62 579 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00609 Spst-Chr5 5199432 5201207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00609 11 584 EXO70 exocyst subunit family AT5G59730 46.305 1.67e-171 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00609 K07195 - gmx:100801773 819.305