Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00604 ATGATTGATTGGAGAAATATTGGTTTTTTTATCTGTGTTTTATCAATCTTCCCCCTTGTATGTTTTTCTGCCACCTTTGTTCCAGTAGATAATTATCTTATAGATTGTGGAGCATCTGCTAGTACTACAGTGGATAGGCGGAATTTCACAGCAGATAATTTGTCCAAAGATCTCCTTTCTACTCAAGAAGATATTCTTGCCACTGCCCCCTTAAAATCAATTAATTCTTCCTCCGATGATTCGCCTCTCTATCAAACTGCAAGAATCTTCACTGGATCCTCCAAGTACACCTTTACGATTAAGCAACAGGGGAGACACTGGATCCGTCTATATTTCTGTCCATTTACTTATGAGAAGTACAATTTGAGTGCTGCAAATTTCACTGTTTCCACCCAAGAACATGTCCTTTTCCGTAGCAGCTCCAACATGCAGAAAGATCCTGTGATGAAGGAGTACTCTCTGAATGTAACCTCAGACACCCTTGTTATCACCTTTGCCCCTTCTGGAAATTCCACCGCTTTTGTGAATGCAATTGAAGTTGTTTCTGCCCCTGATGACCTCATTGATGACGTTTTTTCCGCCTTAGATCCATCGACAACCTTATCTGGGTTGGTGACACAGACACTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCAACTGTGACCCCTATGAATGACACCCTTCAAAGAACTTGGATTCCAGATCAAAATTTCCTTTTGGAACCTAACCTTGCCTCGTTTGCTTCTAATATTGATGCTGTCAAGTATGAGCAAGGTGGGTCAACAACCGAAAACACCGCTCCGCCTACTGTTTATGGTACTCTTACACAGATGAACTCAACCTCTGATCCCCGAAATAATTTCAATGTGACATGGAAGTTTGATGTGAGTCCTGGATTTCAGTATCTTGTTCGATTTCACTTCTGTGATGTGATCAGTAAAATTCTCAATGTACTCTACTTCAATGTTTATGTTAACTCCGACATTGCTGCCTCTGATGTTGATCTCAGTGTTTATACTAATAATGTATTGGGTGTTGCATATCATAAGGATTTCGTTACAGCCTTGGCTGTCAACAGTACACTTCTTGTAAGTATTGGTCCTTCTGCTTTAACTAAGGCCTTGCCTAATGCTATTTTGAATGGACTGGAGATCATGAAAATAAACAATTCTATGGGCAGTCTTGTCACAGGAGCAGGACCTATGGCTATTGCTTCAGGTTCAAGTTCTAAGAGTATTGGCATGATTGTGGGTGTGATTATTGGTGTAGTTGGTGCAGTTGTCTTGGCTGGCGTTTTCTTTGTATTATGCATGAGAAGAAGAAAGTTGGTACGGCAAAGGCAGTCAAAGACATGGGTTCCTTTATCCATCAATGATGGAACTACTTCTCATACCATGGGAAGTAAATATTCCAATGGTACAACACTAAGTGCTGCTTCAAACTATGAGTATCGCGTGCCTTTTCTTGCAGTTCAGGAGGCTACAAACAACTTTGATGAGAGTTGGGTTATTGGGATAGGTGGTTTCGGTAAAGTGTACAAAGGAGAGTTAAGTGATGGCAGAAAAGTGGCAGTTAAGAGGGGGAATCCACGGTCCCAGCAGGGGCTTGCAGAATTCCAAACTGAAATTGAAATGCTGTCTCAGTTTCGCCATCGCCATCTGGTGTCTTTGATTGGTTATTGTGATGAAAGGAGTGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAGAGTCATTTATATGGTTCAGGTTTGCCTAGCTTGAGCTGGAAGGAGAGGCTTGAGATATGCATTGGATCAGCTAGAGGACTTCATTATCTTCACACTGGCTATGCTAAAGCTGTTATTCACCGAGATGTGAAGTCTGCAAATATCCTACTTGATGAGAACCTAATGGCTAAAGTAGCTGATTTTGGATTATCAAAGACGGGGCCTGAAATTGACCAGACACATGTGAGCACAGCTGTCAAAGGTAGTTTTGGGTACCTTGATCCAGAGTATTTCAGGAGGCAACAACTAACAGAAAAGTCGGATGTGTATTCATTTGGGGTAGTTCTGTTTGAAGTTCTTTGTGCAAGGCCTGTCATAGATCCAACACTTCCAAGGGAAATGGTAAACTTGGCAGAATGGGCAATGAAATGGCAGAAGAAAGGGCAGTTGGAGCAAATCATAGATCAAACACTTGCAGGCAAAATCAGGCCAGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAGAAATGCTTGGCTGACTATGGTGTTGACAGACCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCTATGGTTCAAGGTGATCCTGAAGAAAACAGCACAAATATGATTGGTGAACTCTCTCCACAGGTTAACAATTTCAGCCAGGATGCAATTGCTTCTACTGCGCAATTTGAAGGGACAAGTCTGGATGATCTCTCTGGTGTTTCTATGAGTAGGGTCTTCTCACAATTGGTGAAGTCTGAGGGTAGATAA 2520 0.4187 MIDWRNIGFFICVLSIFPLVCFSATFVPVDNYLIDCGASASTTVDRRNFTADNLSKDLLSTQEDILATAPLKSINSSSDDSPLYQTARIFTGSSKYTFTIKQQGRHWIRLYFCPFTYEKYNLSAANFTVSTQEHVLFRSSSNMQKDPVMKEYSLNVTSDTLVITFAPSGNSTAFVNAIEVVSAPDDLIDDVFSALDPSTTLSGLVTQTLETVWRVNMGGPTVTPMNDTLQRTWIPDQNFLLEPNLASFASNIDAVKYEQGGSTTENTAPPTVYGTLTQMNSTSDPRNNFNVTWKFDVSPGFQYLVRFHFCDVISKILNVLYFNVYVNSDIAASDVDLSVYTNNVLGVAYHKDFVTALAVNSTLLVSIGPSALTKALPNAILNGLEIMKINNSMGSLVTGAGPMAIASGSSSKSIGMIVGVIIGVVGAVVLAGVFFVLCMRRRKLVRQRQSKTWVPLSINDGTTSHTMGSKYSNGTTLSAASNYEYRVPFLAVQEATNNFDESWVIGIGGFGKVYKGELSDGRKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERSEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLEQIIDQTLAGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAMVQGDPEENSTNMIGELSPQVNNFSQDAIASTAQFEGTSLDDLSGVSMSRVFSQLVKSEGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00604 839 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00604 839 PANTHER OS07G0166700 PROTEIN 486 776 IPR045272 GO:0004714|GO:0006468
Spst5g00604 839 FunFam Receptor-like protein kinase FERONIA 575 790 - -
Spst5g00604 839 Gene3D - 31 184 - -
Spst5g00604 839 Gene3D - 207 391 - -
Spst5g00604 839 CDD STKc_IRAK 505 770 - -
Spst5g00604 839 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Spst5g00604 839 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00604 839 Gene3D Transferase(Phosphotransferase) domain 1 575 793 - -
Spst5g00604 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Spst5g00604 839 SUPERFAMILY Protein kinase-like (PK-like) 476 770 IPR011009 -
Spst5g00604 839 Gene3D Phosphorylase Kinase; domain 1 461 574 - -
Spst5g00604 839 FunFam receptor-like protein kinase FERONIA 463 574 - -
Spst5g00604 839 FunFam Putative receptor-like protein kinase 31 184 - -
Spst5g00604 839 FunFam Receptor-like protein kinase FERONIA 208 391 - -
Spst5g00604 839 Pfam Malectin-like domain 34 389 IPR024788 -
Spst5g00604 839 Pfam Protein tyrosine and serine/threonine kinase 504 711 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00604 Spst-Chr5 5156177 5158696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00604 10 839 Receptor kinase-like Gene Family AT3G46290 65.352 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst5g00604 Malectin_like 1.3e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00604 - - gmx:100305416 1388.63