Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00594 ATGGATCGGTCAGAGAAATCGCCGAAGAAAGTCTCATCACTGAGATCTTCATTTCCGAGAGATCCACGTGGCTCACTCGAAGTATTCAATCCAAACACTTCAACTTCAACGAACTCGGGCGAGCGTTCGCAGCCGATTCGGAAACCATGGATGGAGCCGGAGGAACCGCGCAACGAAATCTCCGCCACGTCGTGGATGGCAATTAATCCAGAGCCGCTGACAGACGGAGAATGTGGCGCGGCAGTGCAAAGGGCCGCGGAGTGGGGGTTGGTGCTCCAAACCGACACCAAGACCGGCAAGCCGCAGGGCGTGGCGGTGAGGAACTCCGGCGGCGAGGAACCCAGGAAGAACTCTCAGAGCTCCGTCAGAACCTCTGGCGACTCCACCGACGGAGGCACCGTGGGTGGGACTCCGGGCATTTCGGAGGAAGTGGTGGGGGCTTTATCGGCTTTCCAACAAACTTTTGTGGTCTCGGATGCTACCAAACCCGATTTCCCGATCCTGTTTGCGAGTGCCGGGTTCTTTCATATGACGGGGTATACGTCCAAGGAAGTTATCGGGAGAAACTGTCGGTTTTTGCAGGGTGCGGATACGGATCCTGCTGACGTGGCAAAGATACGGGAAGCATTGCGTATTGGGAGCGGTTACTGTGGAAGGTTGTTAAATTACAAGAAGGATGGGACACCTTTCTGGAACCTTCTCACCATTTCACCCATTAAGGACGAAGATGGCAAGGTGCTCAAATTTATCGGAATGCAAGTTGAGGTTAGCAAGCACACGGAGGGGTTCAAGGAGAAGACCGTACGTCCCAATGGAATGCCCGAATCCTTGATTCGATACGATGCACGCCAGAAAGAGAAGGCTACAAGCTCAGTATCTGAGTTGGTGCAGGCCATGAATCGCCCCCGAGCATTGAGTGAATCCGCAACCCGTCCCTTTATCAGAAAATCAAGATTTGCTGAGGAAGAAAAACAATCACAACATGCCGAAAAAGAGAAAGGGAAAGTAGAGAAAACATCAAGAAGAAAATCTGAGAGTACGGCTTCATTTGGAAGCAAATCTGAAAGAGGAAATCAAATTTCAATGCACCGAAACAGTGATGTGCCTGAAAATAAACTGAGAAACTCTCTGCGCCGTTCTTTCATGGGGTTCAGGCGGAAAAGTCAGTCCACCAATGAAAGCGTGGAAAGTGAAATTGGGGACGTCACCTTTCAGTATGAGGATGATGAGAGGCCTGATAGTTTTGAACTAGATGACATAGAAAAGACGAGGGAAAAGAGAAAAGGTCTTGATCTTGCTACCACGCTTGAGCGCATTGAGAAAAACTTTGTCATTTCTGATCCAAGGCTTCCAGACAATCCAGTAATCTTTGCATCCGATAGTTTCTTAGAGCTTACAGAATATAGTCGTGAAGAAATCTTGGGAAGGAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCGAGCAACTGTGAGAAAAATTAAAGAGGCAATTGACAACCAAACAGAAGTTACCGTGCAACTGATTAATTATACCAAGAGTGGTAAGCTGAATGTTAGGGAATGCTTACCAGGAAAGAAGTTCTGGAACCTGTTTCATTTACAACCTATGCGTGATCAGAAGGGAGAGGTGCAATATTTTATTGGTGTTCAACTTGATGGCAGTCAACACGTAGAGCCTCTTCACAACCGCATCAACGAAGATACTGCAAAGGAGGGAGAACAAATGATCAAACAAACTGCAGAAAATGTTGATTTGGCGGTGAGAGATCTTCCGGATGCTAATACGAAACCACACGATTTATGGGAAAATCATTCAAAACCAGTTTACCCCAAACCCCATAGGAAGAATGATCCAGCATGGAAAGCTATCCAGAAGGTCCTAGAAAGTGGAGAACAGATAGGCTTAAAGCACTTTAGGCCGATTAAACCTTTAGGTTCTACTGTTAACGTGGGGGTTAAATTAAGTGTCAGTGTGCATCTGGTGGAGCTACGTGGAACAGGTCAATATTTTGCCATGAAGGCTATGGATAAGGGTGTGGTGCTGAATCGTAACAAGGTGCATAGAACTTGCGCAGAGAGAGAAATCCTTGACAAGCTGGATCACCCTTTTCTACCTGTATTATATGCTTCGTTCCAGACCAAAACACACATTTGTTTGGTAACTGATTATTGTCCTGGGGGAGAACTATTCCTGCTTCTTGATCGGCAACCAACTAAGACTCTAAACGAGGACGCGGTGAGATTTTATGTAGCTGAGATAGTGATTGCATTGGAGTACCTTCACTGCCAAGGGATAATATATCGAGATTTGAAACCTGAAAATGTGTTAATTCAGAGCAACGGGCATGTGTCGCTAACCGATTTTGATTTGTCATGTTTAACATATACTAAGCCACAGCTTATAATTTCAGTTTTCAATTCAAAAAAGAAAAAGAAGAAACATAAAATTCAGGAGGTTCCAATGTTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTACATAGCTCCGGTTTGTCACACTAGTGCTGTGGATTGGTGGGCTATAGGTATTCTTATATATGAAATGCTTTTTGGATATACTCCATTCCGCGGGAGAACAAGACAAAAAACATTTGCAAATATTCTTCACAAGGATCTTAAATTTCCCAAAGGTAAACTGGTTACTGTCATGGTTAAGCAGCTAATTTATTTGTTGTTGCAAAGAGATCCCAGCAAAAGATTGGGGGCACGTGAGGGAGCAAATGAAATTAAACAGCATCCTTTCTTCCAGGGTGTCAATTGGGCACTAGTTCGTTGCATGAAACCTCCTGAGCTTGATGCTCCTGCGTTACCGACAATTGAAGAAGAAGAAAGAATAGCCAAAGATACTGAGGATTTACGGACAAATTTTTTCTGA 2916 0.451 MDRSEKSPKKVSSLRSSFPRDPRGSLEVFNPNTSTSTNSGERSQPIRKPWMEPEEPRNEISATSWMAINPEPLTDGECGAAVQRAAEWGLVLQTDTKTGKPQGVAVRNSGGEEPRKNSQSSVRTSGDSTDGGTVGGTPGISEEVVGALSAFQQTFVVSDATKPDFPILFASAGFFHMTGYTSKEVIGRNCRFLQGADTDPADVAKIREALRIGSGYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGMQVEVSKHTEGFKEKTVRPNGMPESLIRYDARQKEKATSSVSELVQAMNRPRALSESATRPFIRKSRFAEEEKQSQHAEKEKGKVEKTSRRKSESTASFGSKSERGNQISMHRNSDVPENKLRNSLRRSFMGFRRKSQSTNESVESEIGDVTFQYEDDERPDSFELDDIEKTREKRKGLDLATTLERIEKNFVISDPRLPDNPVIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVRKIKEAIDNQTEVTVQLINYTKSGKLNVRECLPGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRINEDTAKEGEQMIKQTAENVDLAVRDLPDANTKPHDLWENHSKPVYPKPHRKNDPAWKAIQKVLESGEQIGLKHFRPIKPLGSTVNVGVKLSVSVHLVELRGTGQYFAMKAMDKGVVLNRNKVHRTCAEREILDKLDHPFLPVLYASFQTKTHICLVTDYCPGGELFLLLDRQPTKTLNEDAVRFYVAEIVIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTYTKPQLIISVFNSKKKKKKHKIQEVPMFMAEPMRASNSFVGTEEYIAPVCHTSAVDWWAIGILIYEMLFGYTPFRGRTRQKTFANILHKDLKFPKGKLVTVMVKQLIYLLLQRDPSKRLGAREGANEIKQHPFFQGVNWALVRCMKPPELDAPALPTIEEEERIAKDTEDLRTNFF 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00594 971 Gene3D Phosphorylase Kinase; domain 1 658 957 - -
Spst5g00594 971 MobiDBLite consensus disorder prediction 314 344 - -
Spst5g00594 971 PANTHER FLIPPASE KINASE 1-RELATED 324 947 - -
Spst5g00594 971 Pfam Protein kinase domain 659 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00594 971 CDD STKc_phototropin_like 637 951 - -
Spst5g00594 971 SUPERFAMILY PYP-like sensor domain (PAS domain) 447 553 IPR035965 -
Spst5g00594 971 Gene3D PAS domain 154 309 - -
Spst5g00594 971 ProSiteProfiles Protein kinase domain profile. 639 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00594 971 SMART pac_2 217 259 IPR001610 -
Spst5g00594 971 SMART pac_2 516 557 IPR001610 -
Spst5g00594 971 MobiDBLite consensus disorder prediction 112 135 - -
Spst5g00594 971 Pfam PAS domain 451 553 IPR000014 -
Spst5g00594 971 Pfam PAS domain 161 257 IPR000014 -
Spst5g00594 971 MobiDBLite consensus disorder prediction 595 616 - -
Spst5g00594 971 MobiDBLite consensus disorder prediction 27 44 - -
Spst5g00594 971 FunFam Putative LOV domain-containing protein 154 310 - -
Spst5g00594 971 MobiDBLite consensus disorder prediction 382 399 - -
Spst5g00594 971 SMART serkin_6 639 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00594 971 CDD PAS 451 553 IPR000014 -
Spst5g00594 971 ProSiteProfiles PAS repeat profile. 428 501 IPR000014 -
Spst5g00594 971 MobiDBLite consensus disorder prediction 345 366 - -
Spst5g00594 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Spst5g00594 971 ProSiteProfiles PAC domain profile. 513 566 IPR000700 -
Spst5g00594 971 FunFam Putative LOV domain-containing protein 729 941 - -
Spst5g00594 971 SUPERFAMILY Protein kinase-like (PK-like) 658 951 IPR011009 -
Spst5g00594 971 MobiDBLite consensus disorder prediction 93 139 - -
Spst5g00594 971 SUPERFAMILY PYP-like sensor domain (PAS domain) 161 253 IPR035965 -
Spst5g00594 971 Coils Coil 319 339 - -
Spst5g00594 971 MobiDBLite consensus disorder prediction 302 418 - -
Spst5g00594 971 CDD PAS 163 256 IPR000014 -
Spst5g00594 971 SMART pas_2 430 499 IPR000014 -
Spst5g00594 971 SMART pas_2 142 211 IPR000014 -
Spst5g00594 971 MobiDBLite consensus disorder prediction 1 62 - -
Spst5g00594 971 ProSiteProfiles PAC domain profile. 214 268 IPR000700 -
Spst5g00594 971 MobiDBLite consensus disorder prediction 404 418 - -
Spst5g00594 971 FunFam LOV domain-containing protein 417 591 - -
Spst5g00594 971 Gene3D Transferase(Phosphotransferase) domain 1 729 952 - -
Spst5g00594 971 Gene3D PAS domain 417 591 - -
Spst5g00594 971 NCBIfam PAS domain S-box protein 164 259 IPR000014 -
Spst5g00594 971 NCBIfam PAS domain S-box protein 455 553 IPR000014 -
Spst5g00594 971 ProSiteProfiles PAS repeat profile. 140 211 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00594 Spst-Chr5 5049187 5061678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00594 1 971 AGC Kinase Gene Family AT3G45780 63.372 0.0 1228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst5g00594 Pkinase 2.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00594 K20715 - gmx:100817565 1518.44