Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00592 ATGGGTTGCTTTCGTTGCGCGGGGAAATCCAGCAAAAAATCTAACAACAACGTTAACCGCACTCAGAAGCGCATTGCTGCTGTTGTCAAAGTTGATTTGAATGATAATGGTAAAAGAGAAGATAATAATCGTAAGCCTGATCAGCTATCTCTAGACGTGAAGAAATTGAATTTAAAAGAGGTTTCTGATGAAGGAAAAGTTAAAAGTTACCGGGCACAAACATTTATTTTTGATGAGCTTGCAGCTGCATCAAGGAATTTTAGGTCAGATTGCTTTCTGGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGGCGCATAGAGAAAATAAATCAGTTTGTGGCAATAAAGCAGCTAGACCCTTATGGGAATCAAGGAATTAGGGAATTTGTTGTTGAAGTATTGACATTGAGTTTGGCAAAGCACCCTAATTTGGTCAAGTTAATTGGGTTTTGTGCTGAGGGAGAGCAGAGACTATTGGTTTATGAGTACATGCCATTGGGATCTCTGGAGAAGCATTTGCAGGATCTTCCCCGTACTAGAAAACCACTTGATTGGAATACAAGAATGAAAATTGCGGCTGGTGCAGCTAGAGGTTTAGAGTATTTGCATGATAAAATGAAGCCTCCTGTCATATACCGTGACTTGAAGTGCTCCAATATTTTGTTAGGTGAGGGCTATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAGGTAGGACCAAGTGGAGATAAGACCCACGTGTCAACAAGAGTCATGGGAACATATGGGTATTGTGCTCCAGATTATGCAATGACGGGTCAATTGACGTTCAAATCTGATATCTATAGCTTTGGAGTTGTTCTTTTGGAGATCATCACGGGGAGGAAGGCCATTGACAATAAGAAACCTGCTAAAGAACAAAGTCTAGTTGCATGGGCAAGACCTTTGTTCAAAGACCGAAAAAGATTCTGTGAGATGGTTGACCCGTTGCTTCTAGGTCAGTATCCAGTAAGAGGTTTGTACCAAGCTCTTGCTATTGCTGCCATGTGTGTTCAAGAGCAAGCTAATATGCGGCCTGTCATAGCTGATGTGGTTACAGCTCTAAATTACCTCGAATCCCAGAAGTACGATCCCCAAATTCATTCAATTCAAAGCTCTACAAAAGGTTCCACTTCTTCAAGACCAAGAAGCAATAATCATAGAGAAACTGTTTGTAGTGGTTATGATCCCAGAGCGAGAGAAGTCGGTTATATACCAATTGTTAATAATGGCAATAGTAGTGGTTCTGAGACAGAAAGCTCTATAAAAGGTCTATCTTCTCCAAGAGTGAGAAGTGATGATGGTCATAGACATTTTGTTAGTAATGGTTCCGAGACAGACAGTTCTGGAGATTAG 1374 0.4098 MGCFRCAGKSSKKSNNNVNRTQKRIAAVVKVDLNDNGKREDNNRKPDQLSLDVKKLNLKEVSDEGKVKSYRAQTFIFDELAAASRNFRSDCFLGEGGFGKVYKGRIEKINQFVAIKQLDPYGNQGIREFVVEVLTLSLAKHPNLVKLIGFCAEGEQRLLVYEYMPLGSLEKHLQDLPRTRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEIITGRKAIDNKKPAKEQSLVAWARPLFKDRKRFCEMVDPLLLGQYPVRGLYQALAIAAMCVQEQANMRPVIADVVTALNYLESQKYDPQIHSIQSSTKGSTSSRPRSNNHRETVCSGYDPRAREVGYIPIVNNGNSSGSETESSIKGLSSPRVRSDDGHRHFVSNGSETDSSGD 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00592 457 MobiDBLite consensus disorder prediction 413 433 - -
Spst5g00592 457 MobiDBLite consensus disorder prediction 374 397 - -
Spst5g00592 457 FunFam probable serine/threonine-protein kinase RLCKVII 59 163 - -
Spst5g00592 457 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Spst5g00592 457 MobiDBLite consensus disorder prediction 374 457 - -
Spst5g00592 457 PANTHER OS07G0668900 PROTEIN 3 373 - -
Spst5g00592 457 SUPERFAMILY Protein kinase-like (PK-like) 74 385 IPR011009 -
Spst5g00592 457 Gene3D Phosphorylase Kinase; domain 1 56 163 - -
Spst5g00592 457 Gene3D Transferase(Phosphotransferase) domain 1 164 385 - -
Spst5g00592 457 CDD STKc_IRAK 93 362 - -
Spst5g00592 457 Pfam Protein kinase domain 92 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00592 457 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00592 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Spst5g00592 457 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
Spst5g00592 457 SMART serkin_6 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00592 Spst-Chr5 5023965 5027082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00592 1 405 Glycoside Hydrolase AT3G07070 52.029 4.88e-144 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst5g00592 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00592 - - gmx:100794680 730.709