Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00582 ATGGAGCAGTTTATCGATGACTTGCCGCCGATGGATCTGATGCGATCTGAGAAGATGACCTTCGTTCAGCTCATCATCCCCGTCGAGTCCGCACACCGTGCCATCTCCTATTTAGGAGAACTCGGCCTTCTGCAATTCCGCGACTTAAATGCTGATAAAAGCCCCTTCCAGAGAACATTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCGAGAAAACTACGATTCTTCAAGGATCAAATTAGTAAAGCTGGCCTATTATCTTCTTCTCGTACTGTATTGCAACCAGATATTGACTTGGAGGATTTGGAGGTACAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAATAGTGACAAACTCCGGCAATCATATAATGAACTCTTGGAATTCAAGATTGTATTACAAAAGGCATGTGGCTTTCTTGTTTCAAGTCATAACCTTGCACTTTCCGATGAAAGAGAACTACAAGAGAATGTGTTTTCAAATGATGCCTATGTTGAGACAGCATCCTTACTTGAACAGGAAATGAGACCTCAGTCATCAAATTCGTCTGGTTTAAGATTTATCAGTGGGATAATCTGTAAATCCAAGGTTCTTAGGTTTGAAAGAATGTTGTTTCGTGCAACGAGAGGCAATATGCTATTCAATCAGGCACCTGCTGATGAACAAATCATGGATCCTGTTTCAACTGAGATGATTGAAAAAACAGTGTTCGTTGTGTTCTTCTCTGGGGAACAGGCGAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGCAAGCAGAGGGAAATAACTAGAGAGGTTTCATCACGTCTTACAGACTTAGAGGCAACTTTGGAAGCCGGGGTTAGGCACAGGAACAAGGCTCTAACTTCTGTTGCAGACCATCTAGCGAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAACTTTGATGTTACGAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCCCTGTTTGCCAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCACTGGAGGCAGTGGAATCACCACCTACATACTTTCGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATACGGCGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTAGGAGCATTGGTTCTTATAGCACGTGAAAACAAGCTCAGCACACAGGAGATGGGAAACTATAAGGAGAAGATGGGAATTGAGGTGGAGCTGTTAGCGAGGAGGCCTAACGGAGTGGACAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGATCCATATGCATTTGGAGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTCCTGAATTCCCTGAAGATGAAGATGTCCATTCTGTTCGGTGTTGCACATATGAACTTAGGAATTATATTAAGTTATTTCAATGCTCGGTTCTTTGGAAGCTCATTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACTGTCTATTTGGGTATCTTTCCCTTCTCATTGTTATTAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACGGACAATCTTGGTGAGAATCAGTTGTTTTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCGAAACCTTTTATACTGAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAATTATGGCTTACTGAACACTTCTGAGGTGGATCCTGAGGCTGAGCCTGATTCTGCCAGACAACATCATCATGAAGAATTCAATTTCAGTGAAGTTTTTGTTCACCAAATGATCCATGCCATTGAATTTGTTCTAGGTTCTGTTTCCAATACAGCATCATATCTTCGGCTTTGGGCATTAAGTTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGAGTGCACTTAAAGCCTGACATGATTTTAGATTCTAGTCTGGTGTTGGGGAATGTGGTTGATAATAGTCTTAGTGCATTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGCGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTAACAGAGGATGACGATTGA 2361 0.4176 MEQFIDDLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLLSSSRTVLQPDIDLEDLEVQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHNLALSDERELQENVFSNDAYVETASLLEQEMRPQSSNSSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQREITREVSSRLTDLEATLEAGVRHRNKALTSVADHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLFAKTQMQEALQRATFDSNSQVGIIFHPLEAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARENKLSTQEMGNYKEKMGIEVELLARRPNGVDRDAHTIGLVKYQDPYAFGVDPSWRGSRSELPFLNSLKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNCLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRNYGLLNTSEVDPEAEPDSARQHHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGVHLKPDMILDSSLVLGNVVDNSLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00582 786 PIRSF ATP6V0A1 9 464 IPR026028 GO:0000220|GO:0046961
Spst5g00582 786 PIRSF ATP6V0A1 460 786 IPR026028 GO:0000220|GO:0046961
Spst5g00582 786 Pfam V-type ATPase 116kDa subunit family 489 778 IPR002490 GO:0033179|GO:0046961|GO:1902600
Spst5g00582 786 Pfam V-type ATPase 116kDa subunit family 37 459 IPR002490 GO:0033179|GO:0046961|GO:1902600
Spst5g00582 786 Coils Coil 100 127 - -
Spst5g00582 786 PANTHER VACUOLAR PROTON ATPASES 13 456 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00582 Spst-Chr5 4852144 4867674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00582 1 779 Primary Pumps ATPases(2) AT2G28520 73.374 0.0 1199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00582 K02154 - gmx:100776037 1389.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00582 5 4852144 4867674 Spst5g00582 5 4852144 4867674 ECH
Spst5g00582 5 4852144 4867674 Spst11g01419 11 38573677 38586960 PCT