Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst5g00574 | ATGGATTTAGTAGCTAGTTGCAAGGAAAAATTGCAATATTTTCGGATTAAAGAGCTCAAAGATGTGCTCACTCAGTTGGGACTTTCAAAGCAGGGAAAGAAGCAGGATCTTGTTGATAGGATATTATCTATTCTTTCAGAGGACCAAGGGTTTGTCATTGTGTTTTTGGAGCACAATTTAATATTCAATCCAGTCATCAGCTCAGCTGAAGTTCTAGCTCAATGGTTAATATTGGTCAACCGTATTGGAAAAATTGAATGGAAAACATCGTGGATGATCCTGGGTGGAAGAGGCACTATGGGTGTGAGTCACAAGAAACCTATTTTAGCCATGATTGGCATCAATTTTCTTTACAAGGGACGCCCACCTTTATCTGGCAACATATTCTGGCCAGCTGTTACAGGAGGGCATCCACAACTTAAGCAGCCTCTGCTCTCCATAGTTTCCAATCATCCTCAGACCTGCAGCAATTTTCTGGAAAACCTCAGCCAGTCTTTCATCCCACTACCTGCTGTAGCATTTTCAGTTCAGCTGCTTTGTCTTCTTTTTGGGATTGACAAGTATGTGGTCAACAATTACTACACAAGCCTTTATCCCACTAGGGATGGTGGGTTACACAGCAATGAACCTCAGCCCAGAGTAAAAGATGACAAAGTTGGAAAGCAACGGGTGGCCAAATTAGTGGAGGACACATATAGAAAATTGCAGGTATCTGGGGCCATTGACCCATCATCAAAGGGACAAGGTGCCTCTGACAGTAGTAATGTGAAAATTAAAGGTGAAATTGAGGATTCCTTTCAATCAGATACAAAGATTCGCTGTCTATGTGGAAATGTATTGGATACAGAGCCATTGGTCAAGTGTGAAGATACAAGATGTCATGTGTCGCAGCACATCAACTGTGTTATTATTCCAGAGAAACCTATGGATGGAAGCACACATGTTCCTGATAAATTCTATTGTGAAATATGTCGACTTGATCGAGCAGACCCGTTCTGTGTTTCAGTGACACACCTTTTGTTTCCGGTGAAGCTGACCACAACCAATATTCCCACTGATGGAACCAACCCAGTTCAGAGTGTGGAAAGAACGTTTCAACTCACAAAGGCAAACAAGGAATTGGTATCAAAACCAGAATATGATGTTCAGGCTTGGTGTATGCTTTTGAACGACAAGGTTTCATTCAGGATGCAATGGCCACAATATACAGATCTAAAGGTCAATGGTCTTCCTGTTCGTGCAATTAACAGACCTGGTTCACAGTTGCTTGGGGCTAATGGTCGTGACGCTGGTTCAAATATCACACCATATTCAAAGGACGGAATTAATAGGATTTCCTTAACAGTGTTGGATGCTCGCATATTCTGTTTAGGGGTCCGTATTATTAAAAGGCTCACCATGCCAGAGTCAAGGTTGCTTTCCAAACTTGCCTTACTTTTCAATTATAGTATTCTGGCTGACTTTTGGTTCCTTCAATCCAAGCTTATTGGAACAGTCAAGTTTGATGTTCTAAGCATGATTCCAGAGGAGTCTGATGGTGAGCGTTTCGAAGATGCTCTTGCACGTGTTTGCTGTTGTGTTGGGGGCGGAAATGCAAATGATAATGCTGATAGTGATAGTGATTTGGAAGTGGTTTCAGATACTTTTAGCATCAATCTCCGTTGCCCTATGAGTGGTTCAAGAATGAAGATTGCAGGAAGATTCAAACCTTGTGTTCACATGGGCTGTTTTGATCTTGAAGTTTTTGTTGAAATGAATGAACGATCAAGGAAGTGGCAATGCCCTATATGCCTTAAAAATTATGCTTTGGAGAATATCATTATTGACCCGTACTTCAATCGCATCACTTCTCTGATGAAAAATTGTGGAGAAGAGATTACAGAGGTTGAGGTGAAGCCTGATGGTTTTTGGCGTGTCAAGGTTAAGAATGAAAGTGAACGCCGGGAGTTGGGGACTCTTGCTCAATGGCACCGTCCTGATGGATCCCTCTTTGTTTCTACTGATGAAATAAAGAGAATGGAAAGTTTAAGGCTCAAACAGGAAGGTGTTTCAGATGGTCCTATTGGTTTAAAGCTTGGCATCAGGAAGAATAGTAATGGTGTTTGGGAAGTCAGCAAACCTGAGAATACAAACACCTCTTCTGGTATTAATAGATTGAATGAGGATTTTAAAAATGATGAACATGTTATTATTCCAATGAGCAGCAGTGACACTGGAAGTGGCCGGGATGAAGATGATCGAAGTGTAAATCAGGGTGTTGGTGGGCATATTGATTTTTCTACTGCCAATGGTATTGAGATGGATTCTGTGTTTAACAATAATATTGATTCAGCTTATGGATATTCTGTTCATAATGCATCTGCTCCAATGGGTGATGCAGAAGTTATTATTCTTAGTGATTCAGAAGAAGAAAACGATGTGATGATGTCTCCTACTCCTATAACTGGGTACAATAATAATCAAACTAGTGCTCCAGTTGATGTTTACTCCGTGCTGGAGCCTGTAATTATTGATTCATATACGGAAGATCAGAACCCTGGTGGAAATGCAGGCTTGGGAGTTTTTAATAATCATCCCAGTGAAGATGATTTTGGGATGTCCTCCCTCTGGCCATTGCAATCTGGAACTCCAGCAGTTTCTGGATTCCAATTATTTAGCTCTGAAGTGGAGGATGTATCAGATACGTTGGCTGGTTTGCAGAATGGTAATATGAATTGCTCGTCATCACTGCATGGTTATATGTTGGCCCCAGATAATGTTATGGGATCTAGCACTCTTGCACCAGAATCATCAGTAGTGCGACCTGATGATGATTTACATGGTGGCTTGGTTGACAATCCTCTGGCATTTCCCAGAGAAGATCCCTCCCTTCAGATTTTTCTTCCTACAAAACCAGCAGAATCATCTATGCAGCATGAATTGCGTGATCATGCAGATGTATCAAACGGTGTCTTCACTGAGGATTGGATCTCTCTTAGTCTTGGAGGTGGTGCCACTGGCAGTAATGGTGACACTTCAACGGCAAATGGATTGAATTCCAGATCGCAAATTACATCCAGAGAAGATGCCATAACTTTGACAGATACTGCTCCTTTACTTCTTGGTATCAATGATGTTAGATCTGACAAGTCAAGTAGGAAAAGGTCGGAATCAGATAGCCCTTTCTCATTTCCCCGCCAAAAACGTTCAAAACTGAAGAAAGTTGAGCAGCATTTTTGGTCCTCAGGAAATGGAAGATGA | 3240 | 0.4148 | MDLVASCKEKLQYFRIKELKDVLTQLGLSKQGKKQDLVDRILSILSEDQGFVIVFLEHNLIFNPVISSAEVLAQWLILVNRIGKIEWKTSWMILGGRGTMGVSHKKPILAMIGINFLYKGRPPLSGNIFWPAVTGGHPQLKQPLLSIVSNHPQTCSNFLENLSQSFIPLPAVAFSVQLLCLLFGIDKYVVNNYYTSLYPTRDGGLHSNEPQPRVKDDKVGKQRVAKLVEDTYRKLQVSGAIDPSSKGQGASDSSNVKIKGEIEDSFQSDTKIRCLCGNVLDTEPLVKCEDTRCHVSQHINCVIIPEKPMDGSTHVPDKFYCEICRLDRADPFCVSVTHLLFPVKLTTTNIPTDGTNPVQSVERTFQLTKANKELVSKPEYDVQAWCMLLNDKVSFRMQWPQYTDLKVNGLPVRAINRPGSQLLGANGRDAGSNITPYSKDGINRISLTVLDARIFCLGVRIIKRLTMPESRLLSKLALLFNYSILADFWFLQSKLIGTVKFDVLSMIPEESDGERFEDALARVCCCVGGGNANDNADSDSDLEVVSDTFSINLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNERSRKWQCPICLKNYALENIIIDPYFNRITSLMKNCGEEITEVEVKPDGFWRVKVKNESERRELGTLAQWHRPDGSLFVSTDEIKRMESLRLKQEGVSDGPIGLKLGIRKNSNGVWEVSKPENTNTSSGINRLNEDFKNDEHVIIPMSSSDTGSGRDEDDRSVNQGVGGHIDFSTANGIEMDSVFNNNIDSAYGYSVHNASAPMGDAEVIILSDSEEENDVMMSPTPITGYNNNQTSAPVDVYSVLEPVIIDSYTEDQNPGGNAGLGVFNNHPSEDDFGMSSLWPLQSGTPAVSGFQLFSSEVEDVSDTLAGLQNGNMNCSSSLHGYMLAPDNVMGSSTLAPESSVVRPDDDLHGGLVDNPLAFPREDPSLQIFLPTKPAESSMQHELRDHADVSNGVFTEDWISLSLGGGATGSNGDTSTANGLNSRSQITSREDAITLTDTAPLLLGINDVRSDKSSRKRSESDSPFSFPRQKRSKLKKVEQHFWSSGNGR | 1079 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst5g00574 | 1079 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 530 | 639 | IPR013083 | - | |
Spst5g00574 | 1079 | Gene3D | SAP domain | 1 | 52 | IPR036361 | - | |
Spst5g00574 | 1079 | PANTHER | ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN | 211 | 839 | - | - | |
Spst5g00574 | 1079 | MobiDBLite | consensus disorder prediction | 1040 | 1069 | - | - | |
Spst5g00574 | 1079 | CDD | SP-RING_Siz-like | 552 | 601 | IPR031141 | - | |
Spst5g00574 | 1079 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 262 | 330 | IPR013083 | - | |
Spst5g00574 | 1079 | MobiDBLite | consensus disorder prediction | 201 | 220 | - | - | |
Spst5g00574 | 1079 | CDD | PHD_Bye1p_SIZ1_like | 273 | 324 | - | - | |
Spst5g00574 | 1079 | SMART | sap_9 | 11 | 45 | IPR003034 | - | |
Spst5g00574 | 1079 | SUPERFAMILY | FYVE/PHD zinc finger | 266 | 328 | IPR011011 | - | |
Spst5g00574 | 1079 | SMART | PHD_3 | 273 | 325 | IPR001965 | - | |
Spst5g00574 | 1079 | MobiDBLite | consensus disorder prediction | 1039 | 1079 | - | - | |
Spst5g00574 | 1079 | SUPERFAMILY | SAP domain | 1 | 50 | IPR036361 | - | |
Spst5g00574 | 1079 | Pfam | MIZ/SP-RING zinc finger | 551 | 599 | IPR004181 | GO:0008270 | |
Spst5g00574 | 1079 | Pfam | SAP domain | 13 | 42 | IPR003034 | - | |
Spst5g00574 | 1079 | ProSiteProfiles | SAP motif profile. | 11 | 45 | IPR003034 | - | |
Spst5g00574 | 1079 | MobiDBLite | consensus disorder prediction | 732 | 751 | - | - | |
Spst5g00574 | 1079 | ProSitePatterns | Zinc finger PHD-type signature. | 274 | 324 | IPR019786 | - | |
Spst5g00574 | 1079 | ProSiteProfiles | Zinc finger SP-RING-type profile. | 538 | 621 | IPR004181 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst5g00574 | Spst-Chr5 | 4744912 | 4766033 | Wgd |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst5g00574 | - | K22403 | gmx:100803144 | 1379.77 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst5g00574 | 5 | 4744912 | 4766033 | Spst5g00574 | 5 | 4744912 | 4766033 | ECH | |
Spst5g00574 | 5 | 4744912 | 4766033 | Spst11g01401 | 11 | 38383388 | 38394372 | PCT |