Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00568 ATGTCTGTAATTGACATTCTCTTCCGCGTCGATAGCATTTGTCAAAAATATGACAAATACGATATCGACAAGCAGCGTGAGCTCAACGCCTATGGCGACGACGCCTTTGCTCGCCTCTATGCAGCTGTCGAATCCAGCATTCAAACCGCTCTCAACAAATCGGAGACTGCTTCCACGGAGACCAACAGGGCAGTTGCCGCGGCTTTGAATGCAGAGGTTCGTCGAACCAAGGGTAGACTCATGGACGAGATACCTAAACTGCGCAAATTGGCGCATAAGAAGGGGACGGTAATTAAGGAACATGCGAAGGTAAAATATGATGACCAGACAGAAAATCAATTCCAACTGACCATGGTTAAAGGTCTCACGAAAGAGGATATCGCCGTCCGTCAGGATCTTGTTCTGGCATTGCCCGAGAGAATCCAAGCAATACCAGATGGTATTTCTAGTTCTATTGAAGCTGCAGGATGGACGGCTACCTCATCTCAGCCACATGTCAAGTTTGATTCAGAGGGACAACTTGAGAGTGAGTATTTCCAACAAAGTGAAGAATCCAGTCAGTTCCGGCAAGAGTATGAGATGCGTAGGGTGAAACAGGCATGCAATATTTCTTCAGAGGAAGGGCTTGATATCATATCAGAGGGATTGGATACCTTGAAGGATCTGGCCCGTGATATGAATGAGGAATTGGATCGGCAAGTTCCTTTAATGGATGAAATTGAAAATAAGAATATTGTCATGAATATGTATAAACTGCGTGGCCTGATTATACAGGTGGATAGGGCAACATCTGACGTGAAAAACACTAACGTGAGGCTTAAGAAAACTCTCAACGAGATAAGGTCTAGTCGAAACTTCATCATCGACATCATTCTAATCTGTGTTCTTCTTGGAATCGTTATGTATTTATACAATGCTCTGAGGTGA 927 0.4423 MSVIDILFRVDSICQKYDKYDIDKQRELNAYGDDAFARLYAAVESSIQTALNKSETASTETNRAVAAALNAEVRRTKGRLMDEIPKLRKLAHKKGTVIKEHAKVKYDDQTENQFQLTMVKGLTKEDIAVRQDLVLALPERIQAIPDGISSSIEAAGWTATSSQPHVKFDSEGQLESEYFQQSEESSQFRQEYEMRRVKQACNISSEEGLDIISEGLDTLKDLARDMNEELDRQVPLMDEIENKNIVMNMYKLRGLIIQVDRATSDVKNTNVRLKKTLNEIRSSRNFIIDIILICVLLGIVMYLYNALR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00568 308 PANTHER SYNTAXIN 56 296 IPR045242 -
Spst5g00568 308 Gene3D - 199 277 - -
Spst5g00568 308 CDD SNARE_Qc 206 275 - -
Spst5g00568 308 Pfam SNARE domain 259 300 IPR000727 -
Spst5g00568 308 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 199 242 IPR000727 -
Spst5g00568 308 SUPERFAMILY SNARE fusion complex 192 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00568 Spst-Chr5 4608214 4610565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00568 1 308 SNARE and Associated Proteins AT3G09740 57.556 1.15e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00568 K08506 - gmx:100777251 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00568 5 4608214 4610565 Spst5g00568 5 4608214 4610565 ECH