Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00527 ATGTGCAAGACAAAGATGGCAACCAACGCGGCAAGTCCCACTCGCACACCGCGATCACAACAACGCGCTTCCCAAAGCCCAACACCGTCCTCATCAAGGCCCACGCTCAGGCCCACCACTTCTTTCTCAGACAAACCCTCCACTTCCTACAACTCCACCTCCACCGCCACCACCAGCGCTCACTACACCGGCTCCACTGGCTACCGTCTCTCCTCCGATAACTCCATTTCCAGCCGCACCTCCCTCAACTACCTGCGCGACACGCTCCCCGAAAACCCTCACATCTACGATTTTCCCGAGATCTGCGCCGCCACCAACAACTTCCTTGCCAAGCGCTACTCCTCCTCCACCCCCTGCTGGCGCTGCACTCTCCGTGGCGCCGACGTCATTGTATTCCAGCGCAAGTTCAGACGCAAACTCCAGACCAATCAACTGCAGCAACTGCTCTCCGTTGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTCGGCGCCTCAGTCTCCGGCGACCACATCTACCTCGTCTACGACTTCGTCAACGGCGCCAGCCTCTCCGATTGTCTCCGCAACAAGAACAACACGCACTTCACTGTTCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCGCGGATCTCGCTCACGGCCTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCATAACCATATCAAATCCAGCGGAATCATTGTCACCGAACCTTCATACAACGCTAGGGTTTGTCATTTCGGCGCCGCGCAGCTCTGCGGCGAAATCGACCTCCAATACGAACAATTAGGCGAAATCAGCGAGATCGAGGAGAAATTTCCACAGTCGCCGTCGAGATCCAAGCAATTCGAGGGCGTGCGGGGGTACATGGCGCCGGAATTTCAAGCCTCCGGCGTGGCGACTCAGAAATCTGATGTATACGCTTTCGGAGTGGTGATGTTGGAGCTCTTGTCCGGGGAGGAGCCACTGAAGTTTAAATTCGACGAGAAGACGCGTCAGTTCGTGAGGACGTCGGTGATCGAGGCGGCAACTTCCGCCGTGGACGGCGGTGATAGTAGCGTGCAGGGGAAGCTGAGAAAGTGGGTGGATCGGAGATTAAAAGATTCCTTCCCGGTGGACATAGCGGAGAAGTTGACACGTGTCGCTTTGGAGTGCGTACACGTGGATCCAGATAAGCGACCGAACATGGGACGCGTAGCTGGGAAGATCTCGAAGTTTTATTTGACGTCGAGGATTTGGTCGGACAGTATTAAGATGCCTGATATTACGGTTTCGTTGGGTCCCCGTTGA 1311 0.5553 MCKTKMATNAASPTRTPRSQQRASQSPTPSSSRPTLRPTTSFSDKPSTSYNSTSTATTSAHYTGSTGYRLSSDNSISSRTSLNYLRDTLPENPHIYDFPEICAATNNFLAKRYSSSTPCWRCTLRGADVIVFQRKFRRKLQTNQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVNGASLSDCLRNKNNTHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHNHIKSSGIIVTEPSYNARVCHFGAAQLCGEIDLQYEQLGEISEIEEKFPQSPSRSKQFEGVRGYMAPEFQASGVATQKSDVYAFGVVMLELLSGEEPLKFKFDEKTRQFVRTSVIEAATSAVDGGDSSVQGKLRKWVDRRLKDSFPVDIAEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRIWSDSIKMPDITVSLGPR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00527 436 MobiDBLite consensus disorder prediction 1 74 - -
Spst5g00527 436 SUPERFAMILY Protein kinase-like (PK-like) 117 406 IPR011009 -
Spst5g00527 436 ProSiteProfiles Protein kinase domain profile. 55 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00527 436 PANTHER OS09G0572100 PROTEIN 1 436 - -
Spst5g00527 436 Pfam Protein kinase domain 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00527 436 Gene3D Transferase(Phosphotransferase) domain 1 181 422 - -
Spst5g00527 436 Gene3D Phosphorylase Kinase; domain 1 71 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00527 Spst-Chr5 4198485 4199795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00527 91 424 Receptor kinase-like Gene Family AT1G51940 30.769 3.29e-41 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst5g00527 Pkinase 8.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00527 - - gmx:100809183 708.368