Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00522 ATGGCTGAGATTGAGGGGTCTCCTGGAAGCTCCATGCATGGAGTAACAGGAAGAGAGCAAACATTTGTAGCCTCAGTTACTTCTCCAATGGTCCCCACAGACACCACAGCAAAATTTGCTCTCCCTGTAGATTCTGAGCACAAGGCCAAGGTTTTCAAACTCTTCTCTCTGGCCAATCCCCACATGAGAACCTTCCACCTTTCTTGGATCTCCTTCTTCACCTGCTTCGTCTCGACCTTCGCAGCAGCCCCTCTTGTCCCCATCATCCGTGACAATCTCAACCTCACCAAAAGCGACATTGGAAACGCCGGCGTTGCTTCTGTGTCGGGAAGCATTTTCTCTAGGCTTGCAATGGGTGCAATTTGCGACCTCATGGGTCCACGCTATGGCTGCGCCTTCCTCATCATGCTCTCGGCCCCTACCGTGTTCTGCATGTCCTTTGTGAAAGATGCTGCGGGGTATATAGCGGTTCGGTTCTTGATAGGGTTCTCCTTGGCCACGTTTGTGTCGTGCCAGTACTGGATGAGCACCATGTTCAACAGCAAGATTATAGGGCTTGCTAATGGGACTGCGGCGGGGTGGGGGAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCTTTGGTGTATGAACTTATCAGAAGGGCTGGGGCTACTCCCTTCACTGCTTGGAGGATTGCCTTCTTTGTTCCCGGTTGGTTGCATGTCATCATGGGGATCCTGGTCCTAACTTTAGGTCAGGACTTGCCCGATGGAAACCTTGCGGCCTTGCAGAAAAAGGGTGATGTAGGTAAAGATAAGTTCTCTAAGGTGCTATGGTATGCCATTACAAATTACAGAACATGGATTTTTGCTCTCCTCTATGGTTACTCAATGGGAGTTGAATTGACAACGGACAATATCATTGCAGAGTATTTCTACGACAGATTTAATCTCAAGCTGCACACCGCTGGAGTAATTGCTGCATCGTTTGGAATGGCAAACATAGTTGCCCGACCCTTTGGTGGATATGCTTCTGATGTTGCAGCCCGGGTGTTTGGCATGAGGGGAAGATTGTGGACCCTCTGGATCCTCCAAACCTTAGGAGGGGTTTTCTGTATTTGGCTTGGCCGTGCCAATTCTCTTCCAATTGCTATCTTGTCTATGATTTTGTTCTCTATAGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATCATTCCTTTCATCTCAAGAAGGTCTTTGGGGATTATATCTGGTCTTACTGGTGCAGGTGGAAACTTTGGATCTGGCCTGACCCAATTGGTTTTCTTTTCAACCTCCAAATTCTCCACTGCCACAGGTCTCTCCTTGATGGGGGCGATGATAGTGGCTTGCACTCTTCCTGTGAGTCTTGTTCACTTCCCACAGTGGGGTAGCATGTTCCTACCCCCCTCAAAAGATGTCGAATCCACTGAAGAATCCTACTACACCTCTGAATGGAACGAAGAGGAGAGACAGAAAGGGTTGCACCAGCCAAGTCTCAAGTTCGCTGAGAATAGCCGATCTGAGAGAGGAAAGCGTGTGGCATCAGCCGCAACACCTCCAAATACAACTCCCAGTCATGTCTAG 1590 0.4931 MAEIEGSPGSSMHGVTGREQTFVASVTSPMVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAICDLMGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIAVRFLIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFVPGWLHVIMGILVLTLGQDLPDGNLAALQKKGDVGKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNIIAEYFYDRFNLKLHTAGVIAASFGMANIVARPFGGYASDVAARVFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAILSMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTATGLSLMGAMIVACTLPVSLVHFPQWGSMFLPPSKDVESTEESYYTSEWNEEERQKGLHQPSLKFAENSRSERGKRVASAATPPNTTPSHV 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00522 529 MobiDBLite consensus disorder prediction 485 512 - -
Spst5g00522 529 Gene3D MFS general substrate transporter like domains 265 464 IPR036259 -
Spst5g00522 529 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Spst5g00522 529 FunFam High affinity nitrate transporter 57 254 - -
Spst5g00522 529 FunFam Nitrate transporter 2.1 265 466 - -
Spst5g00522 529 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 515 IPR044772 GO:0015112
Spst5g00522 529 MobiDBLite consensus disorder prediction 480 529 - -
Spst5g00522 529 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Spst5g00522 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Spst5g00522 529 SUPERFAMILY MFS general substrate transporter 59 459 IPR036259 -
Spst5g00522 529 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00522 Spst-Chr5 4153603 4155384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00522 1 529 Inorganic Solute Cotransporters AT1G08090 79.245 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00522 K02575 - gmx:100782969 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00522 5 4153603 4155384 Spst5g00522 5 4153603 4155384 ECH
Spst5g00522 5 4153603 4155384 Spst11g01317 11 37578865 37582671 PCT