Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00430 ATGGGAAAGGACTTGATTTCTTCCGACCAGAACGCTGTTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTAAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCTCACAAAAGGAGAAGACATGCCACATATAAGAGAAAAACCATTTTGTATAACCAACTTGAAGACCAACAAGATGGAGTTACAGAAGCAGAACCCCTCCTGGTCAGACAACATAGCGAAAAATTGCGTGCTGCAGGCAAAAGTTCTCCCAAAAATAGCCAAAAGGAAACACGCACTGGGAAAAAGTTTAACAACGAAAACTCCAAAGGCAGTGGTACCATGGACTGCTCAAGGAAAAACCAGACCAGTAGTGACTATGCACTTCATCTGGAAAAATATGGCAAGACAACAGAAGCCTCCCTTGGCCGTAAGACTATGGAAACAAACAAGCATAATAGAGACATTTCCCGTAAATTTGAGAAACATACTGATGTTTTTGAGTTACTTAGGGTGGAGAAGGATTTATTACTCAAATTTCTTCGAGACATAGACTTTAGTGAGAAAAATCTCCATCAACCTTCCCACAACAAAGCAAGATTGACAAAATGTGGGTCATTTCCTTTAGCCTCAACTTCACAGATGAGAAACATTAGCTCTAGTTCCTTAAAACACAAGCAAAACGAAATTTATCCAAAGGGAGAAAAATTGTTTGCTGGTACCCAAGAATCAGACATGTCGGTGTCTAGTTTTGTGAAAGATATTTCTTATGAGAAGCCCGTAACTTTAGTTAGTGATCTTGGTGTGGATAGTCCCATGAAACAAAAGGCAATCATTTCTTCAAGGTCTTCTCACGGATCAAATCACAAAGGGTGGAACCAATTGGTTGTCAATCAATTCAAAGCTATAAAACAGAAGATAAAACTTGCTCTTGTGGAATTCAGAAAAAGTGGTTACCAAACCTCTGGTCAAGCTATCCGCCACAGAGCTTCACCTGAATATAGCGTCATCAGTAATGAGGAAGAGATATCACAAACATCAGAAGATGGCGCGGTTCAACAATACAAAAGGAGTAAAAGCTCCAATGCAGCTAAAGCTTCTGATTATAATTCCAACAAACATGAAGCTCGGCTCATGCGAAGAACATCTTCTCTGAATGAATCAATGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCAAAGAGGCTAAGTGGAAAAGCTCAAAGTCCAAAAGCTTAAAATTGACAAACGAGGATAGGATCCACAAGAGTGCGCATGTTCCTAAGTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTCTACAAGAGGCACTTTTTGATACAAATGATGTATGGAATACAGTGGAAACTTATAATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTAAAGATGGACAAATCACTTGATCATTTTAAAGAGGCTGAAATTGTAGAAATAGTAGAGGAAAGTGACAAAGATGTTAATCCCAATCTTCTATCTGATAAGATTTTGGAGAAAATTGATGAAGAAGTTACCTGTGACCAAAAGGAGGAAATGCATGAGCCAGCAGTGGAGGATGGAAGTTTTAGCCAAGAAAAAGAAGACATGAGTAATATGACTGCTTATCTTAGCAAGGAGGTGATGACAACTCTTGAAACTAGCTTTAAGGATAATATATCCAGCCATGCAGAAGGTACAGAAGTGAATACCCTAGTCTCTGCATTGGACGAATTGGAAACTGATTTATCAGATAAAGGAAGTGTATGGCCAGACTCTTCATCCAACAGAAATGCTGGTGTGATAACAGCTGAAGACGCACACTACCCTTCCAATTTCAAATATGTGAAAAATGTTCTTGAAATTTCGGGCTTCTTGGGAAATGAGCACAGTCAGATGCGATACACAATAGACCAGCCTCTAAAGCCCTCATTGTTCAAAGATTTGGATACGAGCTTGCGCCATGAAATTGGACCCTCTGAAGAAGAGACAATCAACCCTTATGATCACCAACTCCTTTTTAACTTAGTGAACGAGGTGATGCTTGAAATTTATGGAAGGTCACCAACTTACTTCCCAAGACCATTCTCCTTCAACCCCCGCCTCCATCCAATGCCTAAGGGGCACTACCTTCTGAATGAAGTGTGGACTAGTGTTAATTCATACCTGACCTTAAGACCTGAGCTAGATCAGACACTAGATGATGTTGTGGGTCGTGATTTGGCAAAAGGAAGAGGGTGGATGATCCTTCAGGAGGAAGAGGAGTGTGTAGCACTTGAACTAGAAGAGATGATCATAGATGATTTGTTAGATGAATTAATCTTCTCATGA 2352 0.3984 MGKDLISSDQNAVQIQDNNPGCMWGMLKILDYHRWRVKKVFPHKRRRHATYKRKTILYNQLEDQQDGVTEAEPLLVRQHSEKLRAAGKSSPKNSQKETRTGKKFNNENSKGSGTMDCSRKNQTSSDYALHLEKYGKTTEASLGRKTMETNKHNRDISRKFEKHTDVFELLRVEKDLLLKFLRDIDFSEKNLHQPSHNKARLTKCGSFPLASTSQMRNISSSSLKHKQNEIYPKGEKLFAGTQESDMSVSSFVKDISYEKPVTLVSDLGVDSPMKQKAIISSRSSHGSNHKGWNQLVVNQFKAIKQKIKLALVEFRKSGYQTSGQAIRHRASPEYSVISNEEEISQTSEDGAVQQYKRSKSSNAAKASDYNSNKHEARLMRRTSSLNESMDRYTQLFEKSFSKEAKWKSSKSKSLKLTNEDRIHKSAHVPKFSRSNLSMPNLETLGFILQEALFDTNDVWNTVETYNRVHRKSVSLPLKMDKSLDHFKEAEIVEIVEESDKDVNPNLLSDKILEKIDEEVTCDQKEEMHEPAVEDGSFSQEKEDMSNMTAYLSKEVMTTLETSFKDNISSHAEGTEVNTLVSALDELETDLSDKGSVWPDSSSNRNAGVITAEDAHYPSNFKYVKNVLEISGFLGNEHSQMRYTIDQPLKPSLFKDLDTSLRHEIGPSEEETINPYDHQLLFNLVNEVMLEIYGRSPTYFPRPFSFNPRLHPMPKGHYLLNEVWTSVNSYLTLRPELDQTLDDVVGRDLAKGRGWMILQEEEECVALELEEMIIDDLLDELIFS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00430 783 MobiDBLite consensus disorder prediction 105 121 - -
Spst5g00430 783 Pfam Domain of unknown function (DUF4378) 620 779 IPR025486 -
Spst5g00430 783 MobiDBLite consensus disorder prediction 82 121 - -
Spst5g00430 783 PANTHER PROTEIN TRM32 1 783 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00430 Spst-Chr5 3383679 3387144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00430 158 773 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.125 5.03e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00430 - - vum:124834749 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00430 5 3383679 3387144 Spst5g00430 5 3383679 3387144 ECH