Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00360 ATGTACCATTTCCTGGGGATCTATGTTACTGGCTTTCTCAGCTCCTTTGCTGCAGCTATTGTTTACATCCTATACATATGGTTCTTCCAGATACCTGCATCATTCCAACACTTTTCATTTCTTTGCATATGTGGCGCATTCCATTGGATCCCATTTACCATTGTTGCATATGCCACCATGTTTTCTGATGTCCCATCAAATCCCATTGTCTTTACCATTTCATTTACCTGCGCGTACTTGCTTCATGGCCTCATGCTCACCTCTCTCACCTGTGCCTTGACCCATTTGCTCAAATTCAGTAAAACCCAAACCCATTTTAAAACCTGGCTTAGACATCGATTGACCATTTCCTGCCACCAAAGATTTGCCAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGTTCTATTAGAGCCATCAACCCTGTTTCAAACCCTGAGTTAATGTCAATAGGTGATGGAGTCCATCTTGGTGATTTTAGCAAGATAATCACTGGTTTCCACTATTCAAACGGATATGCTTGTGGAAAAATAGAGGTTCAGGATAATTCAATTGTTGGGAGTCAAAGCATAATCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCATGAGGGTAGCGTGTATATTGGATCTCAAACCCGTGTTGCACACAAGAACTCTTCAAATTCTTTAGATGAAAGGATAGAGGAGATGGACACGGAATACAAGAAAGTAGTTGCTAACATGGCTGCAAATTTAGCTGTAACAACTATCAATGTCAAAGCAAGATACTTCCACCGCATCGGTGTTAGTGGAAAGGGGCACTTGAAAATCTATGACAAACTTGAGGGCATTCCACTGCACAAGGTTTTCCAACCTGGTAAAAGCTACCCTGTCATGATAAGACACAGCAATAGCTTGAGTGCTGACGATGATGCTCGGATCGATGCACGTGGTGCATCTTTGAGGATTCTTTCTGATGCACCCGATTCTAACTATGTTCCCTTCATTGACCTGACACTAAAAACTGGAAATGCATTTTATGCTCGCACTCTTGCTGATTTTGCAAGCTGGCTTGTGTGTGGACTTGCTGCGAGAGAGGAACTTGTTAAGCGTACCCCACATATTCGTGAAGCAGTGTGGAATTCCCTTAGACATGCTCACTCATATGCTGAATTGCACTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTGAAATTTAAACTAAGGCCTATTGACACAAGCATTAGTGAGGACATAGGTAAGGTTGAACCAACTGGGATTCTTCCACCGGAAACAGGTGCAATTCCAAGGGATGAAAATGATACACGACCCTTACTTTTCCTAGCTGAAGATTTTCAAAGGCGCGTGAGTTCCCCTGATGGAATTCGCTATGTCTTCCAAGTGCAACTTCGAGCAGTGCCTGAAGATGAAGCCACACGTGACATTGCACTGGACTGCACAAAACCATGGAACGAAAGTGAATTCCCTTACATTGATGTTGGAGAGATAAACATCACTGAGAATCTCTCTAAGGAAGAATCTGATAGCCTTGTATTTAACCCCTATCTCAAAATCCATGAGTTGGATGTGATCCCTGCCACTTCCAACACCCAAAGTGCTTCAATCGATCATGGCCGTTCATTGATCTACGAGATTTGCCAGCACGTGCGCAATAGACAGCCACTCCCAGACTCTTGGAGAAACCTAGTAGAACAATCTAACGTTAAGGTAGACTTGTCTTGTTGTCCCATCGCAGCATCAGTAGCAACATCAAAGCCCACCAAGGCTACAAAAAAAGTGACAACCTTAACCTTGACAAGAACCTGGTACCAGACATTCTTGGCGGTTTTCATTCAACCGTTGCTACAAACTGTTTTGCCTTACACGGTGGTAGGTTTATCTGTTTTTGCCCCTTTAAACTTTGTTGTGAACATGAAGAGAGTTGAGAAGCTCTCAGTGCAATGGTTGCTTCCTTTGTTTTGGATTCTCTCAGGTGTAATGGGGGCACTGGCAGTTGTTGTGGCCAAATGGGTTCTCGTGGGAAGGAAGAGAGAGGGTGAAACAATACCCTTGTGGAGCAAAAGGGTCATCATGGATAGCACATGGCAAGCGATTAGAACGTTGGTGGGGGACTACTTCATGGACATGGCAACTGGGTCGTTTTTGTTTGTGATGTGGATGAGATTGATGGGTGCAGAGATAGCCATGGATGGTGATGTTTATGTGGACAGCATGGGGGCTTTGTTGAACCCCGAAATGGTGAAGATCGAGAGAGGGGGTTGTGTGGGAAGAGAAGCATTGCTATTTGGCCACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGTGGAATCAAAATTGGTGAAGATGGGTTTGTGGGGAGTAGAGCTGTGATCATGCCTGGTGTGCATGTGGAGAATGAAGCCAATCTCTCTGCCTTGTCTTTAGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 2568 0.4389 MYHFLGIYVTGFLSSFAAAIVYILYIWFFQIPASFQHFSFLCICGAFHWIPFTIVAYATMFSDVPSNPIVFTISFTCAYLLHGLMLTSLTCALTHLLKFSKTQTHFKTWLRHRLTISCHQRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKIEVQDNSIVGSQSIILPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVAHKNSSNSLDERIEEMDTEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKLEGIPLHKVFQPGKSYPVMIRHSNSLSADDDARIDARGASLRILSDAPDSNYVPFIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKRTPHIREAVWNSLRHAHSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDTSISEDIGKVEPTGILPPETGAIPRDENDTRPLLFLAEDFQRRVSSPDGIRYVFQVQLRAVPEDEATRDIALDCTKPWNESEFPYIDVGEINITENLSKEESDSLVFNPYLKIHELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPDSWRNLVEQSNVKVDLSCCPIAASVATSKPTKATKKVTTLTLTRTWYQTFLAVFIQPLLQTVLPYTVVGLSVFAPLNFVVNMKRVEKLSVQWLLPLFWILSGVMGALAVVVAKWVLVGRKREGETIPLWSKRVIMDSTWQAIRTLVGDYFMDMATGSFLFVMWMRLMGAEIAMDGDVYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVIMPGVHVENEANLSALSLAMKGEIVRSR 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00360 855 ProSiteProfiles catalase family profile. 213 855 IPR018028 GO:0004096|GO:0006979|GO:0020037
Spst5g00360 855 SUPERFAMILY Trimeric LpxA-like enzymes 129 255 IPR011004 -
Spst5g00360 855 PANTHER AMINE OXIDASE 99 855 - -
Spst5g00360 855 Gene3D Hexapeptide repeat proteins 726 849 - -
Spst5g00360 855 SUPERFAMILY Trimeric LpxA-like enzymes 701 848 IPR011004 -
Spst5g00360 855 SUPERFAMILY Heme-dependent catalase-like 268 586 IPR020835 GO:0020037
Spst5g00360 855 Gene3D Hexapeptide repeat proteins 104 238 - -
Spst5g00360 855 Gene3D Catalase core domain 239 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00360 Spst-Chr5 2987824 2990391 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00360 - - vra:111241452 1539.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00360 5 2987824 2990391 Spst5g00360 5 2987824 2990391 ECH
Spst5g00360 5 2987824 2990391 Spst2g02391 2 23557898 23567388 PCT